Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHGC3Q9UN70 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGC3Q9UN70 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
PCDHGC3Q9UN70 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGC3Q9UN70 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGC3Q9UN70 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
PCDHGC3Q9UN70 AL391684.1-202ENST00000641293 1636 ntBASIC5.7□□□□□ -1.5
PCDHGC3Q9UN70 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHGC3Q9UN70 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 RNA5SP132-201ENST00000364725 118 ntBASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 RN7SKP81-201ENST00000365603 331 ntBASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 snoU13.30-201ENST00000458951 104 ntBASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 RPS26P21-201ENST00000475397 348 ntBASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 AL360181.4-201ENST00000621752 134 ntBASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 ZNF826P-207ENST00000622273 1910 ntBASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGC3Q9UN70 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 SMG1P6-201ENST00000532337 2930 ntBASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 AL353796.1-201ENST00000561542 3241 ntBASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 RNU1-146P-201ENST00000364015 165 ntBASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 RNA5SP242-201ENST00000364171 118 ntBASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 RNU6-1074P-201ENST00000383995 104 ntBASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 RNU6-1027P-201ENST00000383998 107 ntBASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 RNU6-1035P-201ENST00000384477 107 ntBASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 MIR10A-201ENST00000385043 110 ntBASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 RNA5SP241-201ENST00000391326 114 ntBASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 TMSB10P2-201ENST00000416049 131 ntBASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 AL358453.1-201ENST00000422522 250 ntBASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 AC124916.1-201ENST00000444020 547 ntBASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 RPL23AP81-201ENST00000455252 467 ntBASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 RN7SL547P-201ENST00000490793 290 ntBASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 Y_RNA.679-201ENST00000516416 91 ntBASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGC3Q9UN70 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGC3Q9UN70 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGC3Q9UN70 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGC3Q9UN70 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGC3Q9UN70 AL034549.2-201ENST00000618285 3373 ntBASIC5.67□□□□□ -1.5
PCDHGC3Q9UN70 RNU1-19P-201ENST00000363306 165 ntBASIC5.67□□□□□ -1.5
PCDHGC3Q9UN70 RNU6-173P-201ENST00000364215 104 ntBASIC5.67□□□□□ -1.5
PCDHGC3Q9UN70 Y_RNA.240-201ENST00000364469 95 ntBASIC5.67□□□□□ -1.5
PCDHGC3Q9UN70 RN7SKP69-201ENST00000365390 305 ntBASIC5.67□□□□□ -1.5
PCDHGC3Q9UN70 RNU6-47P-201ENST00000383866 107 ntBASIC5.67□□□□□ -1.5
PCDHGC3Q9UN70 SNORA5.1-201ENST00000384275 131 ntBASIC5.67□□□□□ -1.5
PCDHGC3Q9UN70 RNU6-1117P-201ENST00000384525 104 ntBASIC5.67□□□□□ -1.5
PCDHGC3Q9UN70 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PCDHGC3Q9UN70 RNA5SP339-201ENST00000390987 122 ntBASIC5.67□□□□□ -1.5
PCDHGC3Q9UN70 BTF3L4P2-201ENST00000392798 346 ntBASIC5.67□□□□□ -1.5
PCDHGC3Q9UN70 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.67□□□□□ -1.5
PCDHGC3Q9UN70 Y_RNA.590-201ENST00000410140 107 ntBASIC5.67□□□□□ -1.5
PCDHGC3Q9UN70 RPL19P16-201ENST00000433839 588 ntBASIC5.67□□□□□ -1.5
PCDHGC3Q9UN70 AL359073.1-201ENST00000448036 403 ntBASIC5.67□□□□□ -1.5
PCDHGC3Q9UN70 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms