Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 LINC00888-204ENST00000487386 421 ntBASIC3.19□□□□□ -1.9
NPC1L1Q9UHC9 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.19□□□□□ -1.9
NPC1L1Q9UHC9 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.19□□□□□ -1.9
NPC1L1Q9UHC9 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.19□□□□□ -1.9
NPC1L1Q9UHC9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.19□□□□□ -1.9
NPC1L1Q9UHC9 NBEAP1-201ENST00000554452 979 ntBASIC3.19□□□□□ -1.9
NPC1L1Q9UHC9 MTCO3P24-201ENST00000572729 782 ntBASIC3.19□□□□□ -1.9
NPC1L1Q9UHC9 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.19□□□□□ -1.9
NPC1L1Q9UHC9 MTND3P19-201ENST00000603825 345 ntBASIC3.19□□□□□ -1.9
NPC1L1Q9UHC9 AC006270.3-201ENST00000605967 1036 ntBASIC3.19□□□□□ -1.9
NPC1L1Q9UHC9 AC131235.4-201ENST00000609288 620 ntBASIC3.19□□□□□ -1.9
NPC1L1Q9UHC9 AC106028.5-201ENST00000610332 395 ntBASIC3.19□□□□□ -1.9
NPC1L1Q9UHC9 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.19□□□□□ -1.9
NPC1L1Q9UHC9 AC068787.1-201ENST00000623908 691 ntBASIC3.19□□□□□ -1.9
NPC1L1Q9UHC9 AC116618.1-201ENST00000634617 774 ntBASIC3.19□□□□□ -1.9
NPC1L1Q9UHC9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPC1L1Q9UHC9 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NPC1L1Q9UHC9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.19□□□□□ -1.9
NPC1L1Q9UHC9 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.19□□□□□ -1.9
NPC1L1Q9UHC9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 AC092881.1-201ENST00000638218 2733 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 SNORA72.3-201ENST00000365074 132 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 DHFRP6-201ENST00000401776 268 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 RNU6-1077P-201ENST00000410506 102 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 RNU4-53P-201ENST00000410828 140 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 CCDC58P2-201ENST00000417131 366 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 AC013410.2-201ENST00000422627 201 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 AL139421.1-201ENST00000423010 169 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 AL645638.1-201ENST00000440519 361 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 PTENP1-201ENST00000447117 1215 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 AL009048.1-201ENST00000450437 298 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 AC027673.1-201ENST00000456245 405 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 AC108729.1-201ENST00000487812 947 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 TBCAP3-201ENST00000512475 312 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 IGKV3-31-201ENST00000523109 329 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 DEFB131D-201ENST00000526803 184 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 AL049838.1-201ENST00000563647 981 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 AC004853.1-201ENST00000604902 698 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 AC245297.2-201ENST00000610119 565 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 AC004696.1-201ENST00000614345 607 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 AC006213.4-201ENST00000616184 634 ntBASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NPC1L1Q9UHC9 DDX43P2-201ENST00000604753 1354 ntBASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 AC006020.1-201ENST00000420179 1854 ntBASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 RNU2-47P-201ENST00000410649 186 ntBASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 MTATP6P4-201ENST00000427725 675 ntBASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 HMGB3P12-201ENST00000438745 556 ntBASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 AL353691.1-201ENST00000451332 387 ntBASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 USP9YP10-201ENST00000454868 628 ntBASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 snoU13.8-201ENST00000458890 104 ntBASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 AC021269.2-201ENST00000532318 330 ntBASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 AC012443.1-201ENST00000605605 231 ntBASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 AL353748.2-201ENST00000622148 471 ntBASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
NPC1L1Q9UHC9 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 ANAPC10P1-201ENST00000395991 556 ntBASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 AL136372.1-201ENST00000403060 228 ntBASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 HMGN2P35-201ENST00000412164 270 ntBASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 RPS15AP38-201ENST00000413110 372 ntBASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 AL592310.1-201ENST00000414330 671 ntBASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 SNRPEP7-201ENST00000438350 220 ntBASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 RNU7-136P-201ENST00000458819 69 ntBASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 MTND5P4-201ENST00000514978 288 ntBASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 RNY4P37-201ENST00000516225 96 ntBASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 AL022099.1-201ENST00000604551 712 ntBASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 AC106791.2-201ENST00000604680 391 ntBASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 AL390208.1-201ENST00000605885 644 ntBASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 AL450472.3-201ENST00000615578 367 ntBASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 MIR6766-201ENST00000622641 72 ntBASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NPC1L1Q9UHC9 AL353746.1-201ENST00000566293 6881 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms