Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 IPO5P1-202ENST00000600039 287 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 AP001330.5-201ENST00000607176 411 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 FTX_3.1-201ENST00000610451 147 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 AL391261.4-201ENST00000616012 481 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 MIR8059-201ENST00000620427 81 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.22□□□□□ -1.73
DDX56Q9NY93 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
DDX56Q9NY93 AC018555.1-201ENST00000567548 1980 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
DDX56Q9NY93 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.21□□□□□ -1.73
DDX56Q9NY93 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.21□□□□□ -1.73
DDX56Q9NY93 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
DDX56Q9NY93 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
DDX56Q9NY93 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.21□□□□□ -1.74
DDX56Q9NY93 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX56Q9NY93 IPO8P1-201ENST00000455509 3109 ntBASIC4.21□□□□□ -1.74
DDX56Q9NY93 SNORD115-7-201ENST00000365306 82 ntBASIC4.21□□□□□ -1.74
DDX56Q9NY93 Y_RNA.576-201ENST00000384781 102 ntBASIC4.21□□□□□ -1.74
DDX56Q9NY93 MIR937-201ENST00000401271 86 ntBASIC4.21□□□□□ -1.74
DDX56Q9NY93 MTHFD2P2-201ENST00000407725 247 ntBASIC4.21□□□□□ -1.74
DDX56Q9NY93 RNA5SP111-201ENST00000411386 101 ntBASIC4.21□□□□□ -1.74
DDX56Q9NY93 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.21□□□□□ -1.74
DDX56Q9NY93 USP9YP6-201ENST00000413550 854 ntBASIC4.21□□□□□ -1.74
DDX56Q9NY93 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.21□□□□□ -1.74
DDX56Q9NY93 RPS4XP4-201ENST00000443195 763 ntBASIC4.21□□□□□ -1.74
DDX56Q9NY93 CECR9-201ENST00000453421 199 ntBASIC4.21□□□□□ -1.74
DDX56Q9NY93 GMFBP1-201ENST00000467831 427 ntBASIC4.21□□□□□ -1.74
DDX56Q9NY93 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.21□□□□□ -1.74
DDX56Q9NY93 ARL4AP2-201ENST00000507378 601 ntBASIC4.21□□□□□ -1.74
DDX56Q9NY93 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
DDX56Q9NY93 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.21□□□□□ -1.74
DDX56Q9NY93 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.21□□□□□ -1.74
DDX56Q9NY93 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
DDX56Q9NY93 RNU6-914P-201ENST00000516749 109 ntBASIC4.21□□□□□ -1.74
DDX56Q9NY93 IGKV2-23-201ENST00000518729 323 ntBASIC4.21□□□□□ -1.74
DDX56Q9NY93 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.21□□□□□ -1.74
DDX56Q9NY93 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.21□□□□□ -1.74
DDX56Q9NY93 AL670379.4-201ENST00000605279 254 ntBASIC4.21□□□□□ -1.74
DDX56Q9NY93 AC004805.2-201ENST00000605382 482 ntBASIC4.21□□□□□ -1.74
DDX56Q9NY93 AC099506.2-201ENST00000623074 221 ntBASIC4.21□□□□□ -1.74
DDX56Q9NY93 AC011944.2-201ENST00000624440 683 ntBASIC4.21□□□□□ -1.74
DDX56Q9NY93 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.21□□□□□ -1.74
DDX56Q9NY93 AC233263.6-201ENST00000631132 1963 ntBASIC4.21□□□□□ -1.74
DDX56Q9NY93 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX56Q9NY93 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
DDX56Q9NY93 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
DDX56Q9NY93 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
DDX56Q9NY93 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
DDX56Q9NY93 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
DDX56Q9NY93 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.2□□□□□ -1.74
DDX56Q9NY93 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.2□□□□□ -1.74
DDX56Q9NY93 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
DDX56Q9NY93 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
DDX56Q9NY93 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
DDX56Q9NY93 FTLP6-201ENST00000355274 422 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX56Q9NY93 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
DDX56Q9NY93 RPL17P50-201ENST00000396131 546 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX56Q9NY93 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.2□□□□□ -1.74
DDX56Q9NY93 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX56Q9NY93 AC092809.3-201ENST00000415453 231 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 AC108032.1-201ENST00000416706 207 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.2□□□□□ -1.74
DDX56Q9NY93 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
DDX56Q9NY93 KCTD9P3-201ENST00000434597 1169 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 RPS15AP9-201ENST00000439856 381 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 RPS24P13-201ENST00000442520 397 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX56Q9NY93 AC093392.2-201ENST00000450682 337 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 RPS29P15-201ENST00000458329 171 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.2□□□□□ -1.74
DDX56Q9NY93 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX56Q9NY93 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.2□□□□□ -1.74
DDX56Q9NY93 AC009646.1-201ENST00000510455 318 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 RNU6-928P-201ENST00000516876 104 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 RNA5SP165-201ENST00000517142 115 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX56Q9NY93 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.2□□□□□ -1.74
DDX56Q9NY93 AC009643.1-201ENST00000532030 391 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.2□□□□□ -1.74
DDX56Q9NY93 AC027807.1-201ENST00000559921 996 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX56Q9NY93 AC008521.1-201ENST00000587471 187 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
DDX56Q9NY93 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.2□□□□□ -1.74
DDX56Q9NY93 AC068790.4-201ENST00000602474 263 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 AP003465.2-201ENST00000602571 373 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 AL138889.2-201ENST00000603883 242 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 AC008945.2-201ENST00000606056 604 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 MIR15A-201ENST00000607334 83 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 AL591424.2-201ENST00000617023 128 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 Z99571.1-201ENST00000636677 394 ntBASIC4.2□□□□□ -1.74
DDX56Q9NY93 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
DDX56Q9NY93 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
DDX56Q9NY93 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
DDX56Q9NY93 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
DDX56Q9NY93 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.19□□□□□ -1.74
DDX56Q9NY93 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
DDX56Q9NY93 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms