Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
MKS1Q9NXB0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
MKS1Q9NXB0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
MKS1Q9NXB0 AC008568.2-201ENST00000623862 2313 ntBASIC4.15□□□□□ -1.75
MKS1Q9NXB0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.14□□□□□ -1.75
MKS1Q9NXB0 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.14□□□□□ -1.75
MKS1Q9NXB0 TNPO1P3-201ENST00000436471 2662 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MKS1Q9NXB0 Y_RNA.86-201ENST00000363020 111 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 Y_RNA.157-201ENST00000363638 102 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 RNU5E-4P-201ENST00000364931 120 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 HSPE1P8-201ENST00000406997 288 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 Z98941.1-201ENST00000407764 100 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 Z85995.1-201ENST00000415547 335 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 SRIP2-201ENST00000428470 166 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MKS1Q9NXB0 RPL23AP52-201ENST00000439311 478 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 CBWD4P-201ENST00000445695 655 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.14□□□□□ -1.75
MKS1Q9NXB0 AL136097.1-201ENST00000456945 913 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 RPL21P104-201ENST00000464143 478 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 RPS20P22-201ENST00000473700 357 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 RPL23AP11-201ENST00000475260 469 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 AC069499.1-201ENST00000489433 509 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 RPL39P36-201ENST00000490784 156 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MKS1Q9NXB0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.14□□□□□ -1.75
MKS1Q9NXB0 CENPUP1-201ENST00000526649 1202 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MKS1Q9NXB0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.14□□□□□ -1.75
MKS1Q9NXB0 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.14□□□□□ -1.75
MKS1Q9NXB0 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.14□□□□□ -1.75
MKS1Q9NXB0 AC020914.4-201ENST00000597690 277 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 AL670379.4-201ENST00000605279 254 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 MIR486-1-201ENST00000612171 68 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 FAM27D1-201ENST00000612308 341 ntBASIC4.14□□□□□ -1.75
MKS1Q9NXB0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MKS1Q9NXB0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
MKS1Q9NXB0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
MKS1Q9NXB0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MKS1Q9NXB0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.14□□□□□ -1.75
MKS1Q9NXB0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MKS1Q9NXB0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
MKS1Q9NXB0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.14□□□□□ -1.75
MKS1Q9NXB0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 Y_RNA.231-201ENST00000364358 102 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 RNU4-20P-201ENST00000365601 151 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 DEFB109C-201ENST00000382575 264 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 DEFB109B-201ENST00000382656 264 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 RNU6-116P-201ENST00000384042 109 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 RNU6-38P-201ENST00000384085 107 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 MIR514A2-201ENST00000385131 88 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 MIR514A3-201ENST00000385132 88 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 CISD1P1-201ENST00000393907 327 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 RPL21P111-201ENST00000418453 477 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 AL121601.2-201ENST00000438019 707 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 MTND5P20-201ENST00000448677 143 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 RNU6-333P-201ENST00000459117 107 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 RPL21P126-201ENST00000470049 478 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 RANP9-201ENST00000519957 271 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 HSPE1P5-201ENST00000561489 272 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 AC007448.1-201ENST00000582714 234 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 AC005730.3-201ENST00000583067 366 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 AL138889.2-201ENST00000603883 242 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 RN7SL722P-201ENST00000617780 284 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 RN7SL565P-201ENST00000618246 284 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 AL357559.1-201ENST00000622228 274 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 AL353746.1-201ENST00000566293 6881 ntBASIC4.13□□□□□ -1.75
MKS1Q9NXB0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
MKS1Q9NXB0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 UBE2L2-201ENST00000254302 429 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 RNU1-14P-201ENST00000362759 152 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 205.2 ms