Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 AL591043.1-201ENST00000432461 424 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 OR6D1P-201ENST00000436165 939 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 RNU6-496P-201ENST00000516145 99 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 SNORA31.18-201ENST00000517043 134 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 AP004371.1-201ENST00000525240 214 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 AC122688.1-201ENST00000541494 223 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 HMGN2P6-201ENST00000551091 273 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 AC027288.2-201ENST00000553028 243 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 AC104465.1-201ENST00000611365 139 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 AC068870.2-201ENST00000620635 389 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 AL031601.2-202ENST00000622650 282 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 AC097372.5-201ENST00000623665 376 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 PABPC1P6-201ENST00000445594 1829 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 BX322639.1-202ENST00000423987 2213 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 LINC01109-201ENST00000603837 3081 ntBASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CUEDC1Q9NWM3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 AC114774.1-201ENST00000507410 1770 ntBASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 RNY3P4-201ENST00000384428 101 ntBASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 RPL23AP27-201ENST00000415161 451 ntBASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 AC092809.3-201ENST00000415453 231 ntBASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 HMGN2P27-201ENST00000427352 270 ntBASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 TDGF1P1-201ENST00000445734 527 ntBASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 PRDX3P3-201ENST00000447765 522 ntBASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 AL445433.1-201ENST00000457507 257 ntBASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 RN7SKP60-201ENST00000516985 239 ntBASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 MIR2355-201ENST00000517199 87 ntBASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 AC067852.3-201ENST00000589177 561 ntBASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 BDH2P1-201ENST00000602288 736 ntBASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 AL162424.1-201ENST00000602325 221 ntBASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 AC006077.1-201ENST00000604746 343 ntBASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 MTND1P7-201ENST00000632801 297 ntBASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 SDAD1P2-201ENST00000441308 2028 ntBASIC5.35□□□□□ -1.55
CUEDC1Q9NWM3 AC092747.4-201ENST00000620519 1861 ntBASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 MTND5P9-201ENST00000503854 1755 ntBASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 AC025031.4-201ENST00000621248 3271 ntBASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 AC090740.1-201ENST00000623193 2262 ntBASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 SNORD113-8-201ENST00000363497 74 ntBASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 RN7SKP103-201ENST00000363848 320 ntBASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 Y_RNA.343-201ENST00000365354 112 ntBASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 RNA5SP235-201ENST00000365411 114 ntBASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 RPL23AP36-201ENST00000413895 458 ntBASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 AC007161.1-204ENST00000423039 460 ntBASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 RNU6-953P-201ENST00000459154 107 ntBASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 SNORD125-201ENST00000459538 96 ntBASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 S100A11P1-201ENST00000477525 312 ntBASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms