Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 Y_RNA.28-201ENST00000362554 111 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 RNU6-1309P-201ENST00000363305 108 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 SNORD113-7-201ENST00000363762 77 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 RNU6-188P-201ENST00000364207 107 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 SNORA9-201ENST00000384215 133 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 RNU11-4P-201ENST00000391149 133 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 U3.29-201ENST00000391296 212 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 RPS12P23-201ENST00000419579 400 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 PDSS1P1-201ENST00000422953 1114 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 AL358176.2-201ENST00000425769 204 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 AC091390.3-201ENST00000426478 338 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 CKS1BP5-201ENST00000434172 273 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 ABCF2P2-201ENST00000450549 296 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 HMGB3P22-202ENST00000451823 572 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 AP000942.1-201ENST00000463969 747 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 RPL7P43-201ENST00000478876 753 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 AC104164.2-201ENST00000496953 495 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 RNU6-64P-201ENST00000517119 105 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 Y_RNA.720-201ENST00000517166 92 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 AC090136.1-201ENST00000520009 240 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 AL137161.1-201ENST00000532231 390 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 AC018630.1-201ENST00000541376 925 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 AC063950.1-201ENST00000552036 308 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 AL606490.9-201ENST00000603331 271 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 SNORA51-201ENST00000606420 132 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 AP001486.3-201ENST00000615334 372 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 BDP1P-201ENST00000582658 1990 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 AC090337.1-201ENST00000579651 2074 ntBASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.74□□□□□ -1.65
PDLIM7Q9NR12 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 AL022322.2-201ENST00000624072 20397 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 RNU6-1078P-201ENST00000364522 103 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 U3.15-201ENST00000365398 212 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 RNU5E-6P-201ENST00000365574 115 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 SNORA24.1-201ENST00000384401 135 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 MIR7-3-201ENST00000384898 110 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 Y_RNA.605-201ENST00000410577 105 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 RNA5SP107-201ENST00000411358 122 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 FABP5P14-201ENST00000437273 393 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 AL137792.2-201ENST00000443484 235 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 RPL5P30-201ENST00000465511 891 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 PTP4A1P4-201ENST00000512479 322 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 SMURF2P1-201ENST00000514992 481 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 RNA5SP454-201ENST00000517231 127 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 RNU6-988P-201ENST00000519081 107 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 AP003385.6-201ENST00000531603 374 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 MIR3672-201ENST00000584290 82 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 AL451044.1-201ENST00000604867 238 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 AC091925.2-201ENST00000625059 256 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 MAPK10-303ENST00000641324 3959 ntBASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM7Q9NR12 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 RNA5SP119-201ENST00000362715 117 ntBASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 SNORA73.2-201ENST00000364946 201 ntBASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 RNU6-61P-201ENST00000365528 109 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms