Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC9.16□□□□□ -0.94
SCAF1Q9H7N4 AC120024.3-201ENST00000603167 156 ntBASIC9.16□□□□□ -0.94
SCAF1Q9H7N4 AC012640.5-201ENST00000623897 319 ntBASIC9.16□□□□□ -0.94
SCAF1Q9H7N4 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SCAF1Q9H7N4 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SCAF1Q9H7N4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
SCAF1Q9H7N4 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SCAF1Q9H7N4 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
SCAF1Q9H7N4 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
SCAF1Q9H7N4 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SCAF1Q9H7N4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SCAF1Q9H7N4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
SCAF1Q9H7N4 Y_RNA.163-201ENST00000363702 113 ntBASIC9.15□□□□□ -0.94
SCAF1Q9H7N4 RNU6-324P-201ENST00000363957 106 ntBASIC9.15□□□□□ -0.94
SCAF1Q9H7N4 Y_RNA.281-201ENST00000364774 94 ntBASIC9.15□□□□□ -0.94
SCAF1Q9H7N4 RNA5SP44-201ENST00000410446 133 ntBASIC9.15□□□□□ -0.94
SCAF1Q9H7N4 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SCAF1Q9H7N4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC9.15□□□□□ -0.94
SCAF1Q9H7N4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC9.15□□□□□ -0.94
SCAF1Q9H7N4 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC9.15□□□□□ -0.94
SCAF1Q9H7N4 AC241585.2-209ENST00000638217 143 ntBASIC9.15□□□□□ -0.94
SCAF1Q9H7N4 AC073869.8-201ENST00000641806 335 ntBASIC9.15□□□□□ -0.94
SCAF1Q9H7N4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC9.15□□□□□ -0.94
SCAF1Q9H7N4 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SCAF1Q9H7N4 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
SCAF1Q9H7N4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
SCAF1Q9H7N4 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC9.15□□□□□ -0.95
SCAF1Q9H7N4 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
SCAF1Q9H7N4 ADAM24P-201ENST00000398655 2101 ntBASIC9.15□□□□□ -0.95
SCAF1Q9H7N4 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 AC093535.2-201ENST00000624769 2326 ntBASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 AC010266.2-201ENST00000564741 3255 ntBASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 Y_RNA.244-201ENST00000364484 109 ntBASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 RNY3P5-201ENST00000384127 102 ntBASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 MIR1255A-201ENST00000408338 113 ntBASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 U3.43-201ENST00000410734 213 ntBASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 AP000936.3-201ENST00000438127 255 ntBASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 CRYGGP-201ENST00000443337 145 ntBASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 AC091874.1-201ENST00000511402 339 ntBASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 RNA5SP395-201ENST00000516567 118 ntBASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 MYL6-213ENST00000549017 502 ntTSL 3 BASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 AL033543.1-201ENST00000623440 13454 ntBASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SCAF1Q9H7N4 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 Y_RNA.229-201ENST00000364347 113 ntBASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 AC146507.2-201ENST00000460608 476 ntBASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 RNU6-436P-201ENST00000516171 114 ntBASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 AL138963.2-201ENST00000605137 226 ntBASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC9.13□□□□□ -0.95
SCAF1Q9H7N4 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 Y_RNA.120-201ENST00000363304 110 ntBASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 MT-TC-201ENST00000387405 66 ntBASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 RNU2-43P-201ENST00000410306 190 ntBASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 AC023141.3-201ENST00000436698 278 ntBASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 AC018630.3-201ENST00000542637 96 ntBASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 MIR1269B-201ENST00000580405 75 ntBASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 AL031274.2-201ENST00000599419 203 ntBASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms