Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 AC010653.1-201ENST00000571108 881 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 AL442067.1-201ENST00000613261 223 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 AC133104.2-201ENST00000615272 193 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 AC007485.1-201ENST00000616755 206 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 AL023881.1-201ENST00000621088 301 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 AC022418.1-201ENST00000624118 445 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 AL669831.3-213ENST00000636676 183 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 AC121333.1-201ENST00000567488 2709 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF38Q9H0F5 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RNF38Q9H0F5 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RNF38Q9H0F5 Y_RNA.5-201ENST00000362334 102 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 Y_RNA.149-201ENST00000363558 117 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 RNA5SP366-201ENST00000365454 123 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RNF38Q9H0F5 MRPL42P3-201ENST00000401492 326 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 RNU6-712P-201ENST00000410558 100 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 RPL23AP26-201ENST00000412728 464 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF38Q9H0F5 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF38Q9H0F5 MCFD2P1-201ENST00000417812 300 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF38Q9H0F5 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF38Q9H0F5 RPL23AP52-201ENST00000439311 478 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 RPS26P2-201ENST00000440331 348 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF38Q9H0F5 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF38Q9H0F5 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RNF38Q9H0F5 RPL12P25-201ENST00000455592 494 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF38Q9H0F5 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.59□□□□□ -1.67
RNF38Q9H0F5 AC079804.1-201ENST00000461922 436 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RNF38Q9H0F5 HMGB1P30-201ENST00000492455 606 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF38Q9H0F5 AC104806.1-201ENST00000508720 308 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 RNU6-976P-201ENST00000516086 111 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 RNU6-764P-201ENST00000516396 105 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 RNU6-64P-201ENST00000517119 105 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 RNU6-794P-201ENST00000517261 64 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF38Q9H0F5 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF38Q9H0F5 AL133153.1-201ENST00000557756 303 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.59□□□□□ -1.67
RNF38Q9H0F5 AC024619.4-201ENST00000580924 316 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 AC091178.1-203ENST00000584586 279 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RNF38Q9H0F5 uc_338.11-201ENST00000619132 160 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 AC139713.2-215ENST00000641428 5037 ntBASIC4.59□□□□□ -1.67
RNF38Q9H0F5 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
RNF38Q9H0F5 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.59□□□□□ -1.68
RNF38Q9H0F5 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 ZNF807-201ENST00000328088 1707 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 AL158163.1-201ENST00000603915 1649 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 RNU6-1115P-201ENST00000362490 106 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 Y_RNA.47-201ENST00000362697 108 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 Y_RNA.158-201ENST00000363651 101 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 Y_RNA.212-201ENST00000364177 102 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 RNA5SP479-201ENST00000364858 117 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 RNU6-61P-201ENST00000365528 109 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 RNU6-1040P-201ENST00000383974 107 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 RNU6-784P-201ENST00000384330 106 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 Y_RNA.482-201ENST00000384377 111 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 RNU11-4P-201ENST00000391149 133 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 RNU6-954P-201ENST00000411355 107 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 AF228730.2-201ENST00000438784 848 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 MTND1P17-201ENST00000448961 204 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 Y_RNA.661-201ENST00000516003 99 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 RNA5SP497-201ENST00000516081 97 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 SNORA31.9-201ENST00000516429 84 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 TOMM20P2-201ENST00000540082 421 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 AC126177.3-201ENST00000551839 688 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 AC025884.1-201ENST00000556034 378 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms