Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 MIR5096-201ENST00000583713 70 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 MIR4795-201ENST00000584182 89 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 MIR4719-201ENST00000585233 84 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 MIR3942-201ENST00000585264 109 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AL022345.1-201ENST00000607292 135 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AL445363.3-201ENST00000623080 671 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AC022418.1-201ENST00000624118 445 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AL133216.2-202ENST00000634512 349 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 MTND1P37-201ENST00000636562 264 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 RNU6-50P-201ENST00000362356 103 ntBASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 RNU6-371P-201ENST00000364283 108 ntBASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 RNA5SP22-201ENST00000365393 109 ntBASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 RNU6-45P-201ENST00000384471 107 ntBASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 Y_RNA.535-201ENST00000384612 99 ntBASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 MIR493-201ENST00000385254 89 ntBASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 AL356967.1-201ENST00000406305 431 ntBASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 RNA5SP129-201ENST00000410276 118 ntBASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 RNA5SP104-201ENST00000410989 118 ntBASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 NCOR1P3-201ENST00000420479 303 ntBASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 AURKAPS2-201ENST00000454983 333 ntBASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 snoU13.1-201ENST00000459157 104 ntBASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 AL160314.1-201ENST00000490836 438 ntBASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 AP002812.1-201ENST00000495378 474 ntBASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 Y_RNA.691-201ENST00000516611 103 ntBASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 RNU6-143P-201ENST00000516942 93 ntBASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 GLYCAM1-201ENST00000546596 285 ntBASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 LARP1BP1-201ENST00000506036 1359 ntBASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRIM55Q9BYV6 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 RNU6-1252P-201ENST00000363054 104 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 Y_RNA.813-201ENST00000364639 102 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 MIR298-201ENST00000401212 88 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 RPS4XP7-201ENST00000406274 780 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 AC063979.1-201ENST00000415539 377 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 CRYBB2P1-203ENST00000415709 538 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 RPLP0P7-201ENST00000416050 667 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 RPL18P10-201ENST00000425606 538 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 HSFY6P-201ENST00000445573 403 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 PNPT1P2-201ENST00000456768 2050 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 RPL23AP56-201ENST00000460778 453 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 AC010326.1-201ENST00000462726 602 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 AC026979.1-201ENST00000492525 396 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 TBCAP3-201ENST00000512475 312 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 SNORA19.2-201ENST00000516013 114 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 RNA5SP154-201ENST00000516193 111 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 RNU6-1315P-201ENST00000517187 99 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 AC135001.1-201ENST00000544546 283 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 AC093027.1-201ENST00000546698 429 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 HSPE1P5-201ENST00000561489 272 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms