Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 AC034229.2-201ENST00000566945 2508 ntBASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 AL121839.2-201ENST00000565058 6943 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 AC144833.1-201ENST00000567953 4089 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 Y_RNA.286-201ENST00000364813 102 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 SNORA70.9-201ENST00000384370 135 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 MIR200C-201ENST00000384980 68 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 RNA5SP317-201ENST00000410176 116 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 RNA5SP251-201ENST00000410614 137 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 RNU6-628P-201ENST00000410675 107 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 Y_RNA.623-201ENST00000411128 95 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 RNA5SP311-201ENST00000411290 116 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 RPL21P90-201ENST00000415692 466 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 AC006511.1-201ENST00000470614 315 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 AC092754.1-201ENST00000472975 479 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 RNA5SP315-201ENST00000516340 116 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 RNA5SP312-201ENST00000517068 116 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 MIR2355-201ENST00000517199 87 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 AP000859.1-201ENST00000525536 307 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 AP002001.1-203ENST00000534002 267 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 CYCSP26-201ENST00000534107 320 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 MIR3613-201ENST00000579844 87 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 MIR4659A-201ENST00000580269 81 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 MIR4433B-201ENST00000581329 102 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 AC243654.2-201ENST00000612843 443 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 AL138721.1-201ENST00000616756 179 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 AC073349.3-201ENST00000617616 186 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 SNORD39.4-201ENST00000620099 78 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 AC233981.2-201ENST00000611524 1614 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 AL445487.1-201ENST00000415694 1580 ntBASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL25A1Q9BXS0 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 AC099654.2-201ENST00000433031 1980 ntBASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 UBE2WP1-201ENST00000362030 340 ntBASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 RNU6-637P-201ENST00000384050 107 ntBASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 FHP1-201ENST00000442741 703 ntBASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 GMPSP1-201ENST00000514075 579 ntBASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 SNORD113-5-201ENST00000607261 78 ntBASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 AL008718.3-201ENST00000610217 321 ntBASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 Y_RNA.778-201ENST00000620203 90 ntBASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 AC004656.1-201ENST00000568479 4951 ntBASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL25A1Q9BXS0 OR56B2P-202ENST00000641377 2453 ntBASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 ADAM24P-201ENST00000398655 2101 ntBASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 MAPK10-304ENST00000641341 3984 ntBASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 RNU6-80P-201ENST00000384195 107 ntBASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 Y_RNA.569-201ENST00000384749 103 ntBASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 MIR449B-201ENST00000384995 97 ntBASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 SNORD78.2-201ENST00000391076 69 ntBASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 RNY4P18-201ENST00000391107 89 ntBASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 PPIAP31-201ENST00000405422 495 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms