Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 RNA5SP258-201ENST00000362750 119 ntBASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 RNU6-153P-201ENST00000364422 104 ntBASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 Y_RNA.398-201ENST00000383952 99 ntBASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 U3.39-201ENST00000408569 239 ntBASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 RNU6-174P-201ENST00000410406 106 ntBASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 RNU6-293P-201ENST00000411259 106 ntBASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 AC093106.2-201ENST00000428212 385 ntBASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 AC068287.1-201ENST00000430283 295 ntBASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 AC016696.1-201ENST00000446949 318 ntBASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 AC005229.2-201ENST00000456995 399 ntBASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 RPS23P5-201ENST00000495419 428 ntBASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 SERF1AP1-201ENST00000514575 187 ntBASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 RNU7-4P-201ENST00000516961 62 ntBASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 FAM60DP-201ENST00000524174 632 ntBASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 AC025423.5-201ENST00000550230 219 ntBASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 AC006023.2-201ENST00000609916 167 ntBASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 AC015914.2-201ENST00000618167 288 ntBASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 U3.53-201ENST00000628922 216 ntBASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 ZNF137P-201ENST00000456718 1920 ntBASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NEDD1Q8NHV4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 AL445487.1-201ENST00000415694 1580 ntBASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 Y_RNA.304-201ENST00000365011 112 ntBASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 MIR649-201ENST00000384843 97 ntBASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 AL645568.3-201ENST00000433683 316 ntBASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 OR4C10P-201ENST00000434991 931 ntBASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 UBE2V1P13-201ENST00000436983 439 ntBASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 snoU13.1-201ENST00000459157 104 ntBASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 MRPL42P6-201ENST00000486397 371 ntBASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 AC108078.2-201ENST00000510750 236 ntBASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 AC008958.1-201ENST00000511047 682 ntBASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 Y_RNA.713-201ENST00000517013 96 ntBASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 MIR5096-201ENST00000583713 70 ntBASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 RPS29P30-201ENST00000600975 111 ntBASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 AL078605.1-201ENST00000603529 500 ntBASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 AC012443.1-201ENST00000605605 231 ntBASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 OR14L1P-202ENST00000641545 3009 ntBASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NEDD1Q8NHV4 AL592148.3-201ENST00000608771 2646 ntBASIC5.46□□□□□ -1.53
NEDD1Q8NHV4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 AC021146.4-201ENST00000309229 279 ntBASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 RNU6-1298P-201ENST00000362456 101 ntBASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 RNU1-85P-201ENST00000364127 164 ntBASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 Y_RNA.383-201ENST00000383855 97 ntBASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 RNU6-441P-201ENST00000384545 106 ntBASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 MIR129-1-201ENST00000384972 72 ntBASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 SNORD115-46-201ENST00000390982 71 ntBASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 AC009220.1-201ENST00000451614 275 ntBASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 SCARNA10-201ENST00000459255 330 ntBASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 AC084198.1-201ENST00000477747 402 ntBASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 RN7SL346P-201ENST00000491561 294 ntBASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 GSTP1P1-201ENST00000548078 319 ntBASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 MIR4715-201ENST00000584117 79 ntBASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 AC104465.1-201ENST00000611365 139 ntBASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NEDD1Q8NHV4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms