Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 AP004607.2-201ENST00000533949 322 ntBASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 TOMM20P2-201ENST00000540082 421 ntBASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 AL360157.1-201ENST00000565962 87 ntBASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 FRG2DP-202ENST00000566967 323 ntBASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 MIR4644-201ENST00000579929 84 ntBASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 AL670379.10-201ENST00000604330 253 ntBASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 AP000787.2-201ENST00000604432 568 ntBASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 AL670379.9-201ENST00000605428 253 ntBASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 AC002076.2-201ENST00000617362 122 ntBASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 MIR6076-201ENST00000617521 113 ntBASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 AC126177.8-201ENST00000618339 1015 ntBASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLRN3Q8NCR9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 AC138393.1-203ENST00000327086 343 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 RPL32P3-201ENST00000359025 275 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 SNORA64.1-201ENST00000362600 132 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 RNU6-166P-201ENST00000384371 107 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 Y_RNA.482-201ENST00000384377 111 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 RNU6-1035P-201ENST00000384477 107 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 MIR130B-202ENST00000385018 82 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 MIR888-201ENST00000401186 77 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 RN7SKP106-201ENST00000410832 272 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 RPL26P27-201ENST00000414397 437 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 ATG3P1-201ENST00000419507 911 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 AL035660.1-201ENST00000422041 222 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 AC092798.1-201ENST00000458542 409 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 HMGB3P15-201ENST00000507326 574 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 AC015795.1-201ENST00000513669 327 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 RN7SKP238-201ENST00000516483 249 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 HMGN2P36-201ENST00000529541 409 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 PCNAP4-201ENST00000532690 730 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 HPRT1P3-201ENST00000539521 576 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 AMZ2P1-203ENST00000565833 850 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 CYP4A43P-201ENST00000568156 121 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 MIR4782-201ENST00000577987 79 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 RPL7P50-201ENST00000600588 727 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 AL133255.1-201ENST00000606374 441 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 RNU4-89P-201ENST00000607443 133 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 MIR6809-201ENST00000612189 116 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 U6.99-201ENST00000637524 83 ntBASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLRN3Q8NCR9 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 RN7SKP103-201ENST00000363848 320 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 RN7SKP124-201ENST00000364730 341 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 RNU6-384P-201ENST00000364900 104 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 XGY1-201ENST00000381172 446 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 MIR10A-201ENST00000385043 110 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 RNU6-1106P-201ENST00000390845 107 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 BX284632.2-201ENST00000421091 399 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 PLA2G12AP2-201ENST00000424744 264 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 RPL7P37-201ENST00000425095 738 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 AL645568.3-201ENST00000433683 316 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 OR6D1P-201ENST00000436165 939 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 PRPF38AP2-201ENST00000438179 851 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 SNORA71B-202ENST00000439232 272 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 AL359955.2-201ENST00000445380 353 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms