Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 OR4K8P-201ENST00000578842 1048 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 AP001029.3-201ENST00000588063 596 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 AC245517.5-201ENST00000611529 162 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 MIR7975-201ENST00000619350 68 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 MTND5P1-201ENST00000445440 1375 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 AC067945.1-201ENST00000342609 618 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 RNU6-511P-201ENST00000363496 107 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 RNU6-522P-201ENST00000364497 107 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 U3.12-201ENST00000364498 214 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 RHOT1P2-201ENST00000366423 333 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 RNU6-831P-201ENST00000384548 107 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 ERLEC1P1-201ENST00000433806 578 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 SNORD121B-201ENST00000458838 81 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 SNORD19B-201ENST00000459623 84 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 AL049714.1-201ENST00000466686 347 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 AC105417.1-201ENST00000514691 285 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 RNU4-29P-201ENST00000515943 174 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 RNU6-1045P-201ENST00000516321 107 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 RN7SKP116-201ENST00000516902 319 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 NARSP2-201ENST00000518524 679 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 AC090281.1-201ENST00000523019 276 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 DEFB109D-201ENST00000529497 240 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 AC103843.2-201ENST00000530523 682 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 AC092470.1-201ENST00000546187 132 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 MIR5195-201ENST00000583555 115 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 AC004853.1-201ENST00000604902 698 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 RMST_9.1-201ENST00000619945 193 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 AL133216.2-202ENST00000634512 349 ntBASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SLC44A3Q8N4M1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 RNVU1-14-201ENST00000384770 164 ntBASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 AL139247.1-201ENST00000422768 325 ntBASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 RPL7L1P10-201ENST00000427790 463 ntBASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 MTATP6P16-201ENST00000434543 526 ntBASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 PPIAP3-201ENST00000450588 505 ntBASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 AL353691.1-201ENST00000451332 387 ntBASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 RPL21P11-201ENST00000461458 483 ntBASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 TTC39CP1-201ENST00000512513 755 ntBASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 RNU6-327P-201ENST00000516270 127 ntBASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 AC007991.1-201ENST00000522680 631 ntBASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 AC124068.1-201ENST00000563131 678 ntBASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 AC093249.1-201ENST00000567049 203 ntBASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 MIR4424-201ENST00000585257 86 ntBASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 AC011471.1-201ENST00000585766 187 ntBASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 AC104237.2-201ENST00000612456 443 ntBASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 MIR7702-201ENST00000621931 59 ntBASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms