Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AC009237.8-201ENST00000445492 379 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AC087588.1-201ENST00000462203 316 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AC034236.1-201ENST00000469891 373 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AL160314.1-201ENST00000490836 438 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 MTCO3P9-201ENST00000506989 781 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 CCDC34P1-201ENST00000507441 517 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 APOOP4-201ENST00000513530 597 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 RNU6-1314P-201ENST00000517139 104 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 MYL12AP1-201ENST00000518490 515 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 RPL7P20-201ENST00000520308 745 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AC107953.1-201ENST00000522216 297 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AC135001.1-201ENST00000544546 283 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AL118558.2-201ENST00000556294 238 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 HSPE1P5-201ENST00000561489 272 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 RN7SL600P-201ENST00000581811 299 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 MIR3158-1-201ENST00000583596 81 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 MIR4424-201ENST00000585257 86 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AL161729.3-201ENST00000603533 673 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AC092747.3-201ENST00000603769 301 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 RNU4-89P-201ENST00000607443 133 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AC009570.1-201ENST00000609599 745 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 MIR6867-201ENST00000610636 67 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AC025253.1-201ENST00000613623 543 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AC009248.2-201ENST00000619826 254 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AC005858.4-201ENST00000623191 700 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 ZNF285B-201ENST00000561698 1767 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 HSPA8P4-201ENST00000511877 1920 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 MIR372-201ENST00000362225 67 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 SNORA62.3-201ENST00000365110 153 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 RNU6-393P-201ENST00000384475 107 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 RNU6-1127P-201ENST00000384580 107 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 RNA5SP219-201ENST00000390940 113 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 VDAC1P9-201ENST00000412766 841 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 YPEL5P1-201ENST00000419731 367 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 GPM6BP2-201ENST00000432046 144 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 AF228730.2-201ENST00000438784 848 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 GPM6BP1-201ENST00000446387 144 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 RPS15AP27-201ENST00000449183 343 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 RPS20P22-201ENST00000473700 357 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 AC022795.1-201ENST00000473808 480 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 AC099522.1-202ENST00000514718 367 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 ATP5F1P5-201ENST00000526403 760 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 CBX3P7-201ENST00000532876 502 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 AC005668.1-201ENST00000571142 476 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 MIR4444-1-201ENST00000581696 74 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 MIR4444-2-201ENST00000584390 74 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 AL161798.1-201ENST00000604630 131 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 U2.17-201ENST00000611454 95 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 AC092435.4-201ENST00000623012 4159 ntBASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SYNPOQ8N3V7 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 AL672296.1-201ENST00000427780 2158 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 AC007390.2-201ENST00000606229 3803 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 RNU1-14P-201ENST00000362759 152 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 RNA5SP175-201ENST00000364275 119 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 RNU6-741P-201ENST00000383889 107 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 MIR708-201ENST00000390708 88 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 RNA5SP372-201ENST00000390836 115 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 RNU6-1197P-201ENST00000391183 107 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 AL583835.1-201ENST00000399570 407 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 Z85995.1-201ENST00000415547 335 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 AL157831.1-201ENST00000426134 473 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms