Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 MIR373-201ENST00000362273 69 ntBASIC1.49□□□□□ -2.17
UBR3Q6ZT12 SNORA18.2-201ENST00000383865 132 ntBASIC1.49□□□□□ -2.17
UBR3Q6ZT12 RNA5SP38-201ENST00000410750 119 ntBASIC1.49□□□□□ -2.17
UBR3Q6ZT12 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
UBR3Q6ZT12 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC1.49□□□□□ -2.17
UBR3Q6ZT12 MTCYBP12-201ENST00000440559 1134 ntBASIC1.49□□□□□ -2.17
UBR3Q6ZT12 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.49□□□□□ -2.17
UBR3Q6ZT12 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
UBR3Q6ZT12 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC1.49□□□□□ -2.17
UBR3Q6ZT12 AC245128.3-201ENST00000594721 748 ntBASIC1.49□□□□□ -2.17
UBR3Q6ZT12 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.49□□□□□ -2.17
UBR3Q6ZT12 AC034236.3-201ENST00000605999 461 ntBASIC1.49□□□□□ -2.17
UBR3Q6ZT12 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
UBR3Q6ZT12 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
UBR3Q6ZT12 AC074117.2-201ENST00000417130 397 ntBASIC1.48□□□□□ -2.17
UBR3Q6ZT12 AC241520.1-201ENST00000422654 1099 ntBASIC1.48□□□□□ -2.17
UBR3Q6ZT12 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.48□□□□□ -2.17
UBR3Q6ZT12 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.48□□□□□ -2.17
UBR3Q6ZT12 MIR449C-201ENST00000516047 92 ntBASIC1.48□□□□□ -2.17
UBR3Q6ZT12 RNU6-943P-201ENST00000516960 98 ntBASIC1.48□□□□□ -2.17
UBR3Q6ZT12 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.48□□□□□ -2.17
UBR3Q6ZT12 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.48□□□□□ -2.17
UBR3Q6ZT12 CYCSP26-201ENST00000534107 320 ntBASIC1.48□□□□□ -2.17
UBR3Q6ZT12 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
UBR3Q6ZT12 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
UBR3Q6ZT12 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
UBR3Q6ZT12 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.48□□□□□ -2.17
UBR3Q6ZT12 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.48□□□□□ -2.17
UBR3Q6ZT12 MIR98-201ENST00000606724 119 ntBASIC1.48□□□□□ -2.17
UBR3Q6ZT12 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.48□□□□□ -2.17
UBR3Q6ZT12 AL138880.2-201ENST00000616214 239 ntBASIC1.48□□□□□ -2.17
UBR3Q6ZT12 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.48□□□□□ -2.17
UBR3Q6ZT12 AL359851.1-201ENST00000569460 4997 ntBASIC1.48□□□□□ -2.17
UBR3Q6ZT12 Y_RNA.36-201ENST00000362602 112 ntBASIC1.48□□□□□ -2.17
UBR3Q6ZT12 HNRNPDLP3-201ENST00000456745 380 ntBASIC1.48□□□□□ -2.17
UBR3Q6ZT12 snoU109.4-201ENST00000458953 143 ntBASIC1.48□□□□□ -2.17
UBR3Q6ZT12 RPS23P3-201ENST00000470993 430 ntBASIC1.48□□□□□ -2.17
UBR3Q6ZT12 BZW1P2-201ENST00000473537 826 ntBASIC1.48□□□□□ -2.17
UBR3Q6ZT12 MTCO3P35-201ENST00000485582 781 ntBASIC1.48□□□□□ -2.17
UBR3Q6ZT12 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
UBR3Q6ZT12 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.48□□□□□ -2.17
UBR3Q6ZT12 MIR514B-201ENST00000516774 80 ntBASIC1.48□□□□□ -2.17
UBR3Q6ZT12 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.48□□□□□ -2.17
UBR3Q6ZT12 AC024619.4-201ENST00000580924 316 ntBASIC1.48□□□□□ -2.17
UBR3Q6ZT12 AC135178.6-201ENST00000605314 398 ntBASIC1.48□□□□□ -2.17
UBR3Q6ZT12 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.48□□□□□ -2.17
UBR3Q6ZT12 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
UBR3Q6ZT12 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
UBR3Q6ZT12 RNU1-148P-201ENST00000384472 162 ntBASIC1.47□□□□□ -2.17
UBR3Q6ZT12 RNA5SP465-201ENST00000391195 109 ntBASIC1.47□□□□□ -2.17
UBR3Q6ZT12 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.47□□□□□ -2.17
UBR3Q6ZT12 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC1.47□□□□□ -2.17
UBR3Q6ZT12 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.47□□□□□ -2.17
UBR3Q6ZT12 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.47□□□□□ -2.17
UBR3Q6ZT12 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.47□□□□□ -2.17
UBR3Q6ZT12 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
UBR3Q6ZT12 AC068831.7-201ENST00000616954 363 ntBASIC1.47□□□□□ -2.17
UBR3Q6ZT12 AC006338.1-201ENST00000618453 749 ntBASIC1.47□□□□□ -2.17
UBR3Q6ZT12 AC012640.5-201ENST00000623897 319 ntBASIC1.47□□□□□ -2.17
UBR3Q6ZT12 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
UBR3Q6ZT12 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
UBR3Q6ZT12 AC110792.3-201ENST00000595906 1614 ntBASIC1.47□□□□□ -2.17
UBR3Q6ZT12 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.46□□□□□ -2.17
UBR3Q6ZT12 RNU6-50P-201ENST00000362356 103 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 RNU4-41P-201ENST00000364426 143 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 AC016769.3-201ENST00000396562 315 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 CYCSP33-201ENST00000414485 327 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 ARL5AP3-201ENST00000439327 386 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 RPL30P11-201ENST00000495304 339 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.46□□□□□ -2.18
UBR3Q6ZT12 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
UBR3Q6ZT12 LTV1P1-201ENST00000510683 1237 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 RNU6-113P-201ENST00000516653 101 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 MTCO1P40-201ENST00000574371 625 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 MIR5000-201ENST00000577717 103 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 AL391646.1-201ENST00000603860 190 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.46□□□□□ -2.18
UBR3Q6ZT12 AL031601.2-202ENST00000622650 282 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 RNU6-234P-201ENST00000365229 104 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 AL591034.1-201ENST00000407447 340 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.46□□□□□ -2.18
UBR3Q6ZT12 RPS3AP44-201ENST00000425466 790 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 MTND4LP16-201ENST00000440828 295 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 RPL21P134-201ENST00000453468 483 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 KLRA1P-201ENST00000503499 986 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.46□□□□□ -2.18
UBR3Q6ZT12 SNORA31.23-201ENST00000517219 133 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 RNU1-104P-201ENST00000517280 175 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.46□□□□□ -2.18
UBR3Q6ZT12 AC005730.3-201ENST00000583067 366 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 AC008739.2-201ENST00000597006 317 ntBASIC1.46□□□□□ -2.18
UBR3Q6ZT12 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.46□□□□□ -2.18
UBR3Q6ZT12 SGO1P2-201ENST00000429458 1589 ntBASIC1.45□□□□□ -2.18
UBR3Q6ZT12 AC121333.1-201ENST00000567488 2709 ntBASIC1.45□□□□□ -2.18
UBR3Q6ZT12 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.45□□□□□ -2.18
UBR3Q6ZT12 MTND2P29-201ENST00000438595 412 ntBASIC1.45□□□□□ -2.18
UBR3Q6ZT12 AC010301.1-201ENST00000473936 355 ntBASIC1.45□□□□□ -2.18
UBR3Q6ZT12 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.45□□□□□ -2.18
UBR3Q6ZT12 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.45□□□□□ -2.18
UBR3Q6ZT12 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms