Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 PTP4A1P4-201ENST00000512479 322 ntBASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 RPL21P7-201ENST00000557463 483 ntBASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 MIR3672-201ENST00000584290 82 ntBASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 HMGB2P1-201ENST00000591146 634 ntBASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 AL354984.3-201ENST00000604803 325 ntBASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 AC027287.1-201ENST00000553115 1453 ntBASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 AC092435.4-201ENST00000623012 4159 ntBASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 Y_RNA.493-201ENST00000384422 102 ntBASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 RNU6-1105P-201ENST00000384774 107 ntBASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 RNU6-754P-201ENST00000391166 107 ntBASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 RNA5SP296-201ENST00000410523 111 ntBASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 VDAC1P9-201ENST00000412766 841 ntBASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 AL391219.1-201ENST00000422570 483 ntBASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 TXNP1-201ENST00000441872 371 ntBASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 HMGB3P22-202ENST00000451823 572 ntBASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 ELOCP24-201ENST00000456370 334 ntBASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 snoU109.4-201ENST00000458953 143 ntBASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 AP000942.1-201ENST00000463969 747 ntBASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 AC023043.2-201ENST00000589678 1026 ntBASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 AL670379.4-201ENST00000605279 254 ntBASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 DUSP12P1-201ENST00000612874 516 ntBASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 AL158196.1-201ENST00000616786 434 ntBASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 SNHG22-203ENST00000617833 660 ntBASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 AC008013.2-202ENST00000637965 364 ntBASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 MTND4P1-201ENST00000457501 1466 ntBASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.38□□□□□ -1.55
PRPF40BQ6NWY9 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 RNU1-14P-201ENST00000362759 152 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 RNU6ATAC-201ENST00000408749 126 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 RNA5SP36-201ENST00000410197 133 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 CYCSP10-201ENST00000417973 294 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 MTCYBP10-201ENST00000424905 650 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 AL157831.1-201ENST00000426134 473 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 IPO7P1-201ENST00000442031 636 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 AL137792.2-201ENST00000443484 235 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 AC007967.1-201ENST00000455422 1159 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 MIR2053-201ENST00000459295 91 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 AC008481.1-201ENST00000463278 396 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 AC026801.2-201ENST00000515352 425 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 AC009902.1-201ENST00000519351 183 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 AC103783.1-201ENST00000520506 373 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 HNRNPCP4-201ENST00000571636 900 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 AF038458.1-201ENST00000588406 262 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 AL670379.10-201ENST00000604330 253 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 AL670379.9-201ENST00000605428 253 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 U2.17-201ENST00000611454 95 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 FAM27D1-201ENST00000612308 341 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 AC012409.4-201ENST00000612923 249 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 PABPC1P7-201ENST00000413177 1513 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 AL359893.1-201ENST00000447628 1580 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 OR51H2P-202ENST00000641424 3046 ntBASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF40BQ6NWY9 AL049641.1-201ENST00000441055 1948 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms