Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 AC068769.1-201ENST00000474767 2426 ntBASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 AC232271.1-201ENST00000602455 2715 ntBASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 Y_RNA.123-201ENST00000363338 102 ntBASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 RNU6-215P-201ENST00000365169 102 ntBASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 RNU6-449P-201ENST00000383914 107 ntBASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 SNORD116-18-201ENST00000383961 92 ntBASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 RNU6-1289P-201ENST00000384431 106 ntBASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 RNA5SP91-201ENST00000390902 119 ntBASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 SNORA46.1-201ENST00000391069 153 ntBASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 RNU6-131P-201ENST00000391144 107 ntBASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 AL592148.1-201ENST00000413568 445 ntBASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 H3F3BP1-201ENST00000440551 403 ntBASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 AC012158.1-204ENST00000483430 465 ntBASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 AC005476.1-201ENST00000554427 397 ntBASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 AC060766.3-201ENST00000591442 263 ntBASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 AC008121.1-201ENST00000603244 268 ntBASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 AL161629.2-201ENST00000615347 275 ntBASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.53□□□□□ -1.52
PTCRAQ6ISU1 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 AL355834.1-201ENST00000556602 3965 ntBASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 Y_RNA.273-201ENST00000364703 102 ntBASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 Y_RNA.353-201ENST00000365440 108 ntBASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 Y_RNA.586-201ENST00000391146 98 ntBASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 RNU6-1025P-201ENST00000410629 104 ntBASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 RNF10P1-201ENST00000418589 369 ntBASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 CRIP1P1-201ENST00000427567 185 ntBASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 RPS20P1-201ENST00000434853 354 ntBASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 AC112498.1-201ENST00000444401 332 ntBASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 AP001025.1-201ENST00000486139 332 ntBASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 RPL21P13-201ENST00000488305 481 ntBASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 ATP5F1P5-201ENST00000526403 760 ntBASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 NDUFB4P11-201ENST00000560510 395 ntBASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 AC091042.1-201ENST00000579213 173 ntBASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 MIR4308-201ENST00000580634 81 ntBASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 MIR4423-201ENST00000580922 80 ntBASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 AL353796.1-201ENST00000561542 3241 ntBASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
PTCRAQ6ISU1 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 MIR410-201ENST00000362222 80 ntBASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 Y_RNA.262-201ENST00000364641 102 ntBASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 Y_RNA.308-201ENST00000365043 101 ntBASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 SNORA36C-201ENST00000384289 132 ntBASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 AL022722.2-201ENST00000402519 180 ntBASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 AP000907.1-201ENST00000428428 510 ntBASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 TOMM22P6-201ENST00000465035 409 ntBASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 AC092754.1-201ENST00000472975 479 ntBASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 AC091959.1-201ENST00000495857 238 ntBASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 RNU7-110P-201ENST00000516891 62 ntBASIC5.51□□□□□ -1.53
PTCRAQ6ISU1 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms