Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AP001781.1-201ENST00000530977 207 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 H3F3AP1-201ENST00000559984 334 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 MIR4679-2-201ENST00000578358 77 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 MIR4444-1-201ENST00000581696 74 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 MIR4444-2-201ENST00000584390 74 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 AC012119.1-201ENST00000603184 222 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 AC098826.3-201ENST00000603823 466 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 AL352984.2-202ENST00000613699 155 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 AL590099.1-201ENST00000615276 138 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 uc_338.9-201ENST00000617424 182 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 MSL3P1-202ENST00000440028 1468 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 AC010300.1-201ENST00000600671 5134 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 AL034549.2-201ENST00000618285 3373 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 SMG1P7-201ENST00000565246 2704 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 OR1L6-202ENST00000373684 1044 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 RNU6-937P-201ENST00000384325 106 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 Y_RNA.504-201ENST00000384481 104 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 RNU6-325P-201ENST00000411132 105 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 RPS12P10-201ENST00000427031 377 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 AL591043.1-201ENST00000432461 424 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 IGHV5-78-201ENST00000450948 295 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 HMGB1P25-201ENST00000468402 607 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 SNORA31.9-201ENST00000516429 84 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 AC136777.2-201ENST00000522979 358 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 AC120057.2-201ENST00000571520 271 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 MIR4308-201ENST00000580634 81 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 MIR3138-201ENST00000585238 82 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 ARF4P1-201ENST00000605447 541 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 RNU6-85P-201ENST00000605989 107 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 MIR3976-201ENST00000606807 139 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 AL589994.2-201ENST00000621124 579 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 AC004158.1-201ENST00000564508 4319 ntBASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO4Q2I0M5 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 AC110774.1-201ENST00000623567 2018 ntBASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 RNU6-595P-201ENST00000363944 107 ntBASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 RNA5SP267-201ENST00000364893 126 ntBASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 RNU6-326P-201ENST00000365480 107 ntBASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 SNORD116-14-201ENST00000383894 92 ntBASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 SNORD116-17-201ENST00000383929 92 ntBASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 Y_RNA.480-201ENST00000384364 102 ntBASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 SNORD116-15-201ENST00000384445 92 ntBASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 SNORD116-20-201ENST00000384529 92 ntBASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 SNORD56.6-201ENST00000384569 71 ntBASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 SNORD116-19-201ENST00000384729 92 ntBASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 AL079342.1-201ENST00000401460 267 ntBASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 RN7SKP17-201ENST00000411242 351 ntBASIC4.86□□□□□ -1.63
RSPO4Q2I0M5 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms