Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 RPL21P5-201ENST00000554662 472 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.4□□□□□ -2.19
ABCA4P78363 MIR3616-201ENST00000584070 92 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 AL645939.4-201ENST00000604495 135 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 AC055876.5-201ENST00000605667 259 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 AC106028.5-201ENST00000610332 395 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 AL161629.2-201ENST00000615347 275 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
ABCA4P78363 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
ABCA4P78363 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
ABCA4P78363 MIR524-201ENST00000385242 87 ntBASIC1.39□□□□□ -2.19
ABCA4P78363 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.39□□□□□ -2.19
ABCA4P78363 UBE2D3P2-201ENST00000424409 445 ntBASIC1.39□□□□□ -2.19
ABCA4P78363 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.39□□□□□ -2.19
ABCA4P78363 AC021146.8-201ENST00000507455 733 ntBASIC1.39□□□□□ -2.19
ABCA4P78363 HMGB1P47-201ENST00000511281 589 ntBASIC1.39□□□□□ -2.19
ABCA4P78363 OR5BM1P-201ENST00000512021 366 ntBASIC1.39□□□□□ -2.19
ABCA4P78363 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.39□□□□□ -2.19
ABCA4P78363 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.39□□□□□ -2.19
ABCA4P78363 DPRXP5-201ENST00000604662 539 ntBASIC1.39□□□□□ -2.19
ABCA4P78363 AC010738.1-201ENST00000604970 987 ntBASIC1.39□□□□□ -2.19
ABCA4P78363 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.39□□□□□ -2.19
ABCA4P78363 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
ABCA4P78363 PRRC2CP1-201ENST00000404428 159 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
ABCA4P78363 AL451074.3-201ENST00000437709 472 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.38□□□□□ -2.19
ABCA4P78363 AC108734.3-201ENST00000481241 1165 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 FABP5P6-201ENST00000510588 409 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 Y_RNA.675-201ENST00000516389 149 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 SNORA31.13-201ENST00000516624 135 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 RNU1-104P-201ENST00000517280 175 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 AC087808.1-201ENST00000520501 361 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.38□□□□□ -2.19
ABCA4P78363 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.38□□□□□ -2.19
ABCA4P78363 AC022709.1-201ENST00000615967 87 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 AL449363.1-201ENST00000617815 186 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.38□□□□□ -2.19
ABCA4P78363 AL353770.2-201ENST00000620024 78 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 MIR6734-201ENST00000621166 68 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 AC095031.1-201ENST00000623685 672 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 HPVC1-201ENST00000629899 1198 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
ABCA4P78363 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
ABCA4P78363 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.38□□□□□ -2.19
ABCA4P78363 RNU6-342P-201ENST00000384521 104 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.38□□□□□ -2.19
ABCA4P78363 AC098614.2-201ENST00000426040 255 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 ARL5AP3-201ENST00000439327 386 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 ARF4P4-201ENST00000439608 520 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 PIGFP3-201ENST00000441918 722 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 MTCO3P17-201ENST00000443775 513 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 AC069528.1-202ENST00000482888 637 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.38□□□□□ -2.19
ABCA4P78363 AC107398.1-201ENST00000486904 505 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 AC093767.1-201ENST00000504523 156 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 AC025768.1-201ENST00000510057 267 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 AP002748.2-201ENST00000528671 348 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 AC121758.2-201ENST00000553271 193 ntBASIC1.38□□□□□ -2.19
ABCA4P78363 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
ABCA4P78363 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
ABCA4P78363 RNU4-13P-201ENST00000364019 141 ntBASIC1.37□□□□□ -2.19
ABCA4P78363 SNORD114-22-201ENST00000365423 72 ntBASIC1.37□□□□□ -2.19
ABCA4P78363 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.37□□□□□ -2.19
ABCA4P78363 SNORD23.1-201ENST00000408212 104 ntBASIC1.37□□□□□ -2.19
ABCA4P78363 RPL17P12-201ENST00000413391 526 ntBASIC1.37□□□□□ -2.19
ABCA4P78363 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.37□□□□□ -2.19
ABCA4P78363 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.37□□□□□ -2.19
ABCA4P78363 RPL7P29-201ENST00000437151 728 ntBASIC1.37□□□□□ -2.19
ABCA4P78363 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.37□□□□□ -2.19
ABCA4P78363 AC090453.1-201ENST00000495560 436 ntBASIC1.37□□□□□ -2.19
ABCA4P78363 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.37□□□□□ -2.19
ABCA4P78363 AC015720.1-201ENST00000565251 277 ntBASIC1.37□□□□□ -2.19
ABCA4P78363 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.37□□□□□ -2.19
ABCA4P78363 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.37□□□□□ -2.19
ABCA4P78363 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.37□□□□□ -2.19
ABCA4P78363 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.37□□□□□ -2.19
ABCA4P78363 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
ABCA4P78363 RNU4-51P-201ENST00000364206 140 ntBASIC1.37□□□□□ -2.19
ABCA4P78363 SNORA6-201ENST00000384033 151 ntBASIC1.37□□□□□ -2.19
ABCA4P78363 RNA5SP354-201ENST00000391247 136 ntBASIC1.37□□□□□ -2.19
ABCA4P78363 MCTS2P-201ENST00000394552 546 ntBASIC1.37□□□□□ -2.19
ABCA4P78363 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.37□□□□□ -2.19
ABCA4P78363 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.37□□□□□ -2.19
ABCA4P78363 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.37□□□□□ -2.19
ABCA4P78363 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC1.37□□□□□ -2.19
ABCA4P78363 AC007395.1-201ENST00000451333 677 ntBASIC1.37□□□□□ -2.19
ABCA4P78363 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.37□□□□□ -2.19
ABCA4P78363 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.37□□□□□ -2.19
ABCA4P78363 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.37□□□□□ -2.19
ABCA4P78363 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.37□□□□□ -2.19
ABCA4P78363 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.37□□□□□ -2.19
ABCA4P78363 AC104057.1-201ENST00000515547 497 ntBASIC1.37□□□□□ -2.19
ABCA4P78363 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.37□□□□□ -2.19
ABCA4P78363 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.37□□□□□ -2.19
ABCA4P78363 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.37□□□□□ -2.19
ABCA4P78363 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.37□□□□□ -2.19
ABCA4P78363 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
ABCA4P78363 RNU6-712P-201ENST00000410558 100 ntBASIC1.36□□□□□ -2.19
ABCA4P78363 RNA5SP489-201ENST00000410986 109 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms