Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CKS1BP61024 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CKS1BP61024 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CKS1BP61024 AC096745.1-201ENST00000509945 370 ntBASIC1.41□□□□□ -2.18
CKS1BP61024 AC098591.2-201ENST00000510152 315 ntBASIC1.41□□□□□ -2.18
CKS1BP61024 AC108043.1-201ENST00000512696 574 ntBASIC1.41□□□□□ -2.18
CKS1BP61024 RNA5SP137-201ENST00000516833 135 ntBASIC1.41□□□□□ -2.18
CKS1BP61024 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.41□□□□□ -2.18
CKS1BP61024 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.41□□□□□ -2.18
CKS1BP61024 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.41□□□□□ -2.18
CKS1BP61024 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.41□□□□□ -2.18
CKS1BP61024 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.41□□□□□ -2.18
CKS1BP61024 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.41□□□□□ -2.18
CKS1BP61024 AL078605.1-201ENST00000603529 500 ntBASIC1.41□□□□□ -2.18
CKS1BP61024 AL589743.7-201ENST00000612637 233 ntBASIC1.41□□□□□ -2.18
CKS1BP61024 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CKS1BP61024 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.41□□□□□ -2.18
CKS1BP61024 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.41□□□□□ -2.18
CKS1BP61024 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CKS1BP61024 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CKS1BP61024 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
CKS1BP61024 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
CKS1BP61024 SNORA36C-201ENST00000384289 132 ntBASIC1.4□□□□□ -2.19
CKS1BP61024 RNU6-19P-201ENST00000384718 107 ntBASIC1.4□□□□□ -2.19
CKS1BP61024 HMGN2P39-201ENST00000398005 273 ntBASIC1.4□□□□□ -2.19
CKS1BP61024 PTGES3P2-201ENST00000407942 482 ntBASIC1.4□□□□□ -2.19
CKS1BP61024 RNU2-43P-201ENST00000410306 190 ntBASIC1.4□□□□□ -2.19
CKS1BP61024 RNU2-49P-201ENST00000410666 184 ntBASIC1.4□□□□□ -2.19
CKS1BP61024 RNA5SP450-201ENST00000411206 102 ntBASIC1.4□□□□□ -2.19
CKS1BP61024 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.4□□□□□ -2.19
CKS1BP61024 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CKS1BP61024 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CKS1BP61024 RPS3P1-201ENST00000456781 192 ntBASIC1.4□□□□□ -2.19
CKS1BP61024 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.4□□□□□ -2.19
CKS1BP61024 RPS29P20-201ENST00000489592 171 ntBASIC1.4□□□□□ -2.19
CKS1BP61024 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CKS1BP61024 AF213884.2-201ENST00000510417 903 ntBASIC1.4□□□□□ -2.19
CKS1BP61024 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.4□□□□□ -2.19
CKS1BP61024 RNU6-970P-201ENST00000516312 107 ntBASIC1.4□□□□□ -2.19
CKS1BP61024 SCARNA16.3-201ENST00000516595 184 ntBASIC1.4□□□□□ -2.19
CKS1BP61024 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.4□□□□□ -2.19
CKS1BP61024 ZNF705CP-201ENST00000530515 889 ntBASIC1.4□□□□□ -2.19
CKS1BP61024 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.4□□□□□ -2.19
CKS1BP61024 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.4□□□□□ -2.19
CKS1BP61024 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.4□□□□□ -2.19
CKS1BP61024 AC105245.1-201ENST00000581934 244 ntBASIC1.4□□□□□ -2.19
CKS1BP61024 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.4□□□□□ -2.19
CKS1BP61024 NRBF2P1-201ENST00000587407 859 ntBASIC1.4□□□□□ -2.19
CKS1BP61024 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.4□□□□□ -2.19
CKS1BP61024 BNIP3P33-201ENST00000598912 569 ntBASIC1.4□□□□□ -2.19
CKS1BP61024 AC242628.1-201ENST00000606810 391 ntBASIC1.4□□□□□ -2.19
CKS1BP61024 AP003400.6-201ENST00000624698 740 ntBASIC1.4□□□□□ -2.19
CKS1BP61024 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.4□□□□□ -2.19
CKS1BP61024 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
CKS1BP61024 ENSAP3-201ENST00000312710 333 ntBASIC1.39□□□□□ -2.19
CKS1BP61024 RNU6-217P-201ENST00000384164 104 ntBASIC1.39□□□□□ -2.19
CKS1BP61024 AL031679.1-201ENST00000400616 525 ntBASIC1.39□□□□□ -2.19
CKS1BP61024 MIR934-201ENST00000401241 83 ntBASIC1.39□□□□□ -2.19
CKS1BP61024 RPL7P27-201ENST00000403775 720 ntBASIC1.39□□□□□ -2.19
CKS1BP61024 AL133384.1-201ENST00000412744 351 ntBASIC1.39□□□□□ -2.19
CKS1BP61024 HMGB1P11-201ENST00000413899 637 ntBASIC1.39□□□□□ -2.19
CKS1BP61024 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.39□□□□□ -2.19
CKS1BP61024 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.39□□□□□ -2.19
CKS1BP61024 AC009237.2-201ENST00000421358 284 ntBASIC1.39□□□□□ -2.19
CKS1BP61024 PTP4A1P7-201ENST00000423476 514 ntBASIC1.39□□□□□ -2.19
CKS1BP61024 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.39□□□□□ -2.19
CKS1BP61024 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.39□□□□□ -2.19
CKS1BP61024 AC018634.1-201ENST00000437554 401 ntBASIC1.39□□□□□ -2.19
CKS1BP61024 RPL26P6-201ENST00000440913 438 ntBASIC1.39□□□□□ -2.19
CKS1BP61024 AL831737.1-201ENST00000441288 271 ntBASIC1.39□□□□□ -2.19
CKS1BP61024 PIGFP3-201ENST00000441918 722 ntBASIC1.39□□□□□ -2.19
CKS1BP61024 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.39□□□□□ -2.19
CKS1BP61024 AC113420.1-201ENST00000507903 571 ntBASIC1.39□□□□□ -2.19
CKS1BP61024 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.39□□□□□ -2.19
CKS1BP61024 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.39□□□□□ -2.19
CKS1BP61024 AC008834.1-201ENST00000511612 175 ntBASIC1.39□□□□□ -2.19
CKS1BP61024 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.39□□□□□ -2.19
CKS1BP61024 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC1.39□□□□□ -2.19
CKS1BP61024 SETP7-201ENST00000552169 453 ntBASIC1.39□□□□□ -2.19
CKS1BP61024 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.39□□□□□ -2.19
CKS1BP61024 AP001269.3-201ENST00000588718 329 ntBASIC1.39□□□□□ -2.19
CKS1BP61024 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CKS1BP61024 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.39□□□□□ -2.19
CKS1BP61024 AC003001.2-201ENST00000616294 831 ntBASIC1.39□□□□□ -2.19
CKS1BP61024 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CKS1BP61024 RNU1-73P-201ENST00000383971 164 ntBASIC1.38□□□□□ -2.19
CKS1BP61024 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CKS1BP61024 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CKS1BP61024 AC019129.1-201ENST00000403786 261 ntBASIC1.38□□□□□ -2.19
CKS1BP61024 Z86062.1-201ENST00000406773 777 ntBASIC1.38□□□□□ -2.19
CKS1BP61024 BTF3P7-201ENST00000407097 488 ntBASIC1.38□□□□□ -2.19
CKS1BP61024 U6atac.2-201ENST00000408644 118 ntBASIC1.38□□□□□ -2.19
CKS1BP61024 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.38□□□□□ -2.19
CKS1BP61024 OR9R1P-201ENST00000412200 877 ntBASIC1.38□□□□□ -2.19
CKS1BP61024 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.38□□□□□ -2.19
CKS1BP61024 AC092047.1-201ENST00000424997 240 ntBASIC1.38□□□□□ -2.19
CKS1BP61024 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.38□□□□□ -2.19
CKS1BP61024 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.38□□□□□ -2.19
CKS1BP61024 BNIP3P2-201ENST00000441221 577 ntBASIC1.38□□□□□ -2.19
CKS1BP61024 AC092757.1-201ENST00000467293 467 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms