Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 RNU6-213P-201ENST00000384051 104 ntBASIC2.87□□□□□ -1.95
PAX9P55771 RNU1-13P-201ENST00000384499 162 ntBASIC2.87□□□□□ -1.95
PAX9P55771 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC2.87□□□□□ -1.95
PAX9P55771 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.87□□□□□ -1.95
PAX9P55771 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.87□□□□□ -1.95
PAX9P55771 MTCO2P19-201ENST00000427513 598 ntBASIC2.87□□□□□ -1.95
PAX9P55771 AC008850.1-201ENST00000427546 362 ntBASIC2.87□□□□□ -1.95
PAX9P55771 AC137499.1-201ENST00000427602 88 ntBASIC2.87□□□□□ -1.95
PAX9P55771 AC093106.2-201ENST00000428212 385 ntBASIC2.87□□□□□ -1.95
PAX9P55771 AL357552.1-201ENST00000445254 415 ntBASIC2.87□□□□□ -1.95
PAX9P55771 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.87□□□□□ -1.95
PAX9P55771 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.87□□□□□ -1.95
PAX9P55771 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.87□□□□□ -1.95
PAX9P55771 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.87□□□□□ -1.95
PAX9P55771 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.87□□□□□ -1.95
PAX9P55771 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.87□□□□□ -1.95
PAX9P55771 SNORA70.16-201ENST00000516390 95 ntBASIC2.87□□□□□ -1.95
PAX9P55771 RNU6-506P-201ENST00000516553 94 ntBASIC2.87□□□□□ -1.95
PAX9P55771 MIR2116-201ENST00000517221 80 ntBASIC2.87□□□□□ -1.95
PAX9P55771 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.87□□□□□ -1.95
PAX9P55771 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.87□□□□□ -1.95
PAX9P55771 AC124947.2-202ENST00000552735 133 ntBASIC2.87□□□□□ -1.95
PAX9P55771 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.87□□□□□ -1.95
PAX9P55771 TPRKBP2-201ENST00000565969 475 ntBASIC2.87□□□□□ -1.95
PAX9P55771 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.87□□□□□ -1.95
PAX9P55771 AL590392.1-201ENST00000604960 446 ntBASIC2.87□□□□□ -1.95
PAX9P55771 AC092954.2-201ENST00000609103 430 ntBASIC2.87□□□□□ -1.95
PAX9P55771 AC010133.1-201ENST00000615809 842 ntBASIC2.87□□□□□ -1.95
PAX9P55771 AL158209.2-201ENST00000619266 216 ntBASIC2.87□□□□□ -1.95
PAX9P55771 AC026585.1-201ENST00000619582 524 ntBASIC2.87□□□□□ -1.95
PAX9P55771 MIR6500-201ENST00000622700 86 ntBASIC2.87□□□□□ -1.95
PAX9P55771 AC110801.1-201ENST00000623590 212 ntBASIC2.87□□□□□ -1.95
PAX9P55771 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.87□□□□□ -1.95
PAX9P55771 MIR6863-201ENST00000636112 90 ntBASIC2.87□□□□□ -1.95
PAX9P55771 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC2.87□□□□□ -1.95
PAX9P55771 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
PAX9P55771 OR5H6-203ENST00000642105 978 ntBASIC2.87□□□□□ -1.95
PAX9P55771 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
PAX9P55771 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PAX9P55771 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.87□□□□□ -1.95
PAX9P55771 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
PAX9P55771 SRP72P2-201ENST00000344851 1979 ntBASIC2.87□□□□□ -1.95
PAX9P55771 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
PAX9P55771 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PAX9P55771 AC027514.1-201ENST00000588561 1603 ntBASIC2.86□□□□□ -1.95
PAX9P55771 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.86□□□□□ -1.95
PAX9P55771 AL021368.2-201ENST00000606125 5352 ntBASIC2.86□□□□□ -1.95
PAX9P55771 SPRR2C-201ENST00000290702 219 ntBASIC2.86□□□□□ -1.95
PAX9P55771 RPL7P26-201ENST00000333817 754 ntBASIC2.86□□□□□ -1.95
PAX9P55771 HSPE1P11-201ENST00000339579 310 ntBASIC2.86□□□□□ -1.95
PAX9P55771 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PAX9P55771 RNU5A-1-201ENST00000362698 116 ntBASIC2.86□□□□□ -1.95
PAX9P55771 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.86□□□□□ -1.95
PAX9P55771 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC2.86□□□□□ -1.95
PAX9P55771 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PAX9P55771 CALM2P3-201ENST00000400429 449 ntBASIC2.86□□□□□ -1.95
PAX9P55771 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PAX9P55771 SNORA3.3-201ENST00000408712 125 ntBASIC2.86□□□□□ -1.95
PAX9P55771 RNA5SP293-201ENST00000410527 113 ntBASIC2.86□□□□□ -1.95
PAX9P55771 RNU6-628P-201ENST00000410675 107 ntBASIC2.86□□□□□ -1.95
PAX9P55771 RNU4-55P-201ENST00000410731 137 ntBASIC2.86□□□□□ -1.95
PAX9P55771 AC093578.1-201ENST00000415219 368 ntBASIC2.86□□□□□ -1.95
PAX9P55771 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PAX9P55771 AC245054.1-201ENST00000420944 258 ntBASIC2.86□□□□□ -1.95
PAX9P55771 AC018630.2-202ENST00000422992 927 ntBASIC2.86□□□□□ -1.95
PAX9P55771 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.86□□□□□ -1.95
PAX9P55771 RPS3AP44-201ENST00000425466 790 ntBASIC2.86□□□□□ -1.95
PAX9P55771 OR2AS1P-201ENST00000427827 319 ntBASIC2.86□□□□□ -1.95
PAX9P55771 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.86□□□□□ -1.95
PAX9P55771 USP12PX-201ENST00000432383 1057 ntBASIC2.86□□□□□ -1.95
PAX9P55771 FCF1P1-201ENST00000432690 571 ntBASIC2.86□□□□□ -1.95
PAX9P55771 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.86□□□□□ -1.95
PAX9P55771 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.86□□□□□ -1.95
PAX9P55771 AP002884.2-201ENST00000471647 395 ntBASIC2.86□□□□□ -1.95
PAX9P55771 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.86□□□□□ -1.95
PAX9P55771 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.86□□□□□ -1.95
PAX9P55771 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.86□□□□□ -1.95
PAX9P55771 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.86□□□□□ -1.95
PAX9P55771 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.86□□□□□ -1.95
PAX9P55771 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.86□□□□□ -1.95
PAX9P55771 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PAX9P55771 AC011979.2-201ENST00000527568 352 ntBASIC2.86□□□□□ -1.95
PAX9P55771 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.86□□□□□ -1.95
PAX9P55771 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.86□□□□□ -1.95
PAX9P55771 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC2.86□□□□□ -1.95
PAX9P55771 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.86□□□□□ -1.95
PAX9P55771 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.86□□□□□ -1.95
PAX9P55771 AC120057.2-201ENST00000571520 271 ntBASIC2.86□□□□□ -1.95
PAX9P55771 AC106900.2-201ENST00000604994 317 ntBASIC2.86□□□□□ -1.95
PAX9P55771 AP002360.4-201ENST00000606980 481 ntBASIC2.86□□□□□ -1.95
PAX9P55771 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.86□□□□□ -1.95
PAX9P55771 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
PAX9P55771 AL157786.1-207ENST00000627771 695 ntBASIC2.86□□□□□ -1.95
PAX9P55771 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.86□□□□□ -1.95
PAX9P55771 MIR4275-201ENST00000636486 87 ntBASIC2.86□□□□□ -1.95
PAX9P55771 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.86□□□□□ -1.95
PAX9P55771 AC068137.3-201ENST00000639191 341 ntBASIC2.86□□□□□ -1.95
PAX9P55771 AC073869.6-201ENST00000640656 341 ntBASIC2.86□□□□□ -1.95
PAX9P55771 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PAX9P55771 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms