Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
PKNOX1P55347 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.54□□□□□ -2
PKNOX1P55347 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.54□□□□□ -2
PKNOX1P55347 SNORA4.1-201ENST00000364263 144 ntBASIC2.54□□□□□ -2
PKNOX1P55347 RNU6-1180P-201ENST00000364935 107 ntBASIC2.54□□□□□ -2
PKNOX1P55347 SNORA23-201ENST00000365128 182 ntBASIC2.54□□□□□ -2
PKNOX1P55347 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.54□□□□□ -2
PKNOX1P55347 SSR1P2-201ENST00000415208 787 ntBASIC2.54□□□□□ -2
PKNOX1P55347 SPA17P1-201ENST00000416656 452 ntBASIC2.54□□□□□ -2
PKNOX1P55347 AC091390.3-201ENST00000426478 338 ntBASIC2.54□□□□□ -2
PKNOX1P55347 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.54□□□□□ -2
PKNOX1P55347 AL512844.2-201ENST00000433990 593 ntBASIC2.54□□□□□ -2
PKNOX1P55347 RPS24P13-201ENST00000442520 397 ntBASIC2.54□□□□□ -2
PKNOX1P55347 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.54□□□□□ -2
PKNOX1P55347 AP000852.1-201ENST00000472460 573 ntBASIC2.54□□□□□ -2
PKNOX1P55347 GTF2IP9-201ENST00000502460 301 ntBASIC2.54□□□□□ -2
PKNOX1P55347 AC002456.2-201ENST00000509356 380 ntBASIC2.54□□□□□ -2
PKNOX1P55347 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.54□□□□□ -2
PKNOX1P55347 MTCO2P15-201ENST00000532655 656 ntBASIC2.54□□□□□ -2
PKNOX1P55347 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.54□□□□□ -2
PKNOX1P55347 AC128657.1-201ENST00000549459 145 ntBASIC2.54□□□□□ -2
PKNOX1P55347 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.54□□□□□ -2
PKNOX1P55347 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.54□□□□□ -2
PKNOX1P55347 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.54□□□□□ -2
PKNOX1P55347 AL442067.2-201ENST00000614033 363 ntBASIC2.54□□□□□ -2
PKNOX1P55347 AC140725.3-201ENST00000616193 880 ntBASIC2.54□□□□□ -2
PKNOX1P55347 AC009268.2-201ENST00000621925 457 ntBASIC2.54□□□□□ -2
PKNOX1P55347 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
PKNOX1P55347 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.54□□□□□ -2
PKNOX1P55347 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.54□□□□□ -2
PKNOX1P55347 MIR4275-201ENST00000636486 87 ntBASIC2.54□□□□□ -2
PKNOX1P55347 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.54□□□□□ -2
PKNOX1P55347 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.54□□□□□ -2
PKNOX1P55347 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
PKNOX1P55347 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
PKNOX1P55347 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
PKNOX1P55347 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
PKNOX1P55347 AL138713.1-201ENST00000624026 2130 ntBASIC2.53□□□□□ -2
PKNOX1P55347 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.53□□□□□ -2
PKNOX1P55347 AL049641.1-201ENST00000441055 1948 ntBASIC2.53□□□□□ -2
PKNOX1P55347 AC007785.2-201ENST00000598627 1916 ntBASIC2.53□□□□□ -2
PKNOX1P55347 MIR6073-201ENST00000352083 89 ntBASIC2.53□□□□□ -2
PKNOX1P55347 RNU6-462P-201ENST00000362659 105 ntBASIC2.53□□□□□ -2
PKNOX1P55347 RNU6-853P-201ENST00000364306 107 ntBASIC2.53□□□□□ -2
PKNOX1P55347 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.53□□□□□ -2
PKNOX1P55347 RNU6-157P-201ENST00000383957 107 ntBASIC2.53□□□□□ -2
PKNOX1P55347 RNU6-198P-201ENST00000384258 104 ntBASIC2.53□□□□□ -2
PKNOX1P55347 RNU6-754P-201ENST00000391166 107 ntBASIC2.53□□□□□ -2
PKNOX1P55347 AL356057.2-201ENST00000403318 432 ntBASIC2.53□□□□□ -2
PKNOX1P55347 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PKNOX1P55347 RNU6-584P-201ENST00000410350 95 ntBASIC2.53□□□□□ -2
PKNOX1P55347 RNU2-25P-201ENST00000411041 191 ntBASIC2.53□□□□□ -2
PKNOX1P55347 AL592148.1-201ENST00000413568 445 ntBASIC2.53□□□□□ -2
PKNOX1P55347 Z85995.1-201ENST00000415547 335 ntBASIC2.53□□□□□ -2
PKNOX1P55347 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.53□□□□□ -2
PKNOX1P55347 AC083875.1-201ENST00000419509 405 ntBASIC2.53□□□□□ -2
PKNOX1P55347 PAXBP1P1-201ENST00000449315 447 ntBASIC2.53□□□□□ -2
PKNOX1P55347 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.53□□□□□ -2
PKNOX1P55347 AL109741.2-201ENST00000455561 343 ntBASIC2.53□□□□□ -2
PKNOX1P55347 AC093809.1-201ENST00000509155 340 ntBASIC2.53□□□□□ -2
PKNOX1P55347 RAC1P5-201ENST00000512182 576 ntBASIC2.53□□□□□ -2
PKNOX1P55347 MTCYBP43-201ENST00000513621 740 ntBASIC2.53□□□□□ -2
PKNOX1P55347 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.53□□□□□ -2
PKNOX1P55347 AC023538.1-201ENST00000534576 736 ntBASIC2.53□□□□□ -2
PKNOX1P55347 MTND4P33-201ENST00000556706 766 ntBASIC2.53□□□□□ -2
PKNOX1P55347 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.53□□□□□ -2
PKNOX1P55347 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.53□□□□□ -2
PKNOX1P55347 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.53□□□□□ -2
PKNOX1P55347 AL450336.1-201ENST00000605180 586 ntBASIC2.53□□□□□ -2
PKNOX1P55347 AL139344.1-201ENST00000605228 195 ntBASIC2.53□□□□□ -2
PKNOX1P55347 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.53□□□□□ -2
PKNOX1P55347 MIR92B-201ENST00000607575 96 ntBASIC2.53□□□□□ -2
PKNOX1P55347 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.53□□□□□ -2
PKNOX1P55347 AC079597.1-201ENST00000624306 508 ntBASIC2.53□□□□□ -2
PKNOX1P55347 AC019226.1-201ENST00000625666 515 ntBASIC2.53□□□□□ -2
PKNOX1P55347 AC110079.1-202ENST00000635213 138 ntBASIC2.53□□□□□ -2
PKNOX1P55347 FO624990.1-201ENST00000636373 85 ntBASIC2.53□□□□□ -2
PKNOX1P55347 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.53□□□□□ -2
PKNOX1P55347 AC099063.3-201ENST00000642066 185 ntBASIC2.53□□□□□ -2
PKNOX1P55347 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.53□□□□□ -2
PKNOX1P55347 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.53□□□□□ -2
PKNOX1P55347 AC009902.3-201ENST00000606235 2172 ntBASIC2.53□□□□□ -2
PKNOX1P55347 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
PKNOX1P55347 AC022336.2-201ENST00000568966 2538 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.52□□□□□ -2.01
PKNOX1P55347 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PKNOX1P55347 RNU6-433P-201ENST00000363216 104 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 RNA5SP393-201ENST00000363423 117 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PKNOX1P55347 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
PKNOX1P55347 RNU6-1035P-201ENST00000384477 107 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 MIR513B-201ENST00000385136 84 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 U3.20-201ENST00000390909 217 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 RN7SKP266-201ENST00000410232 287 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 RNU6-516P-201ENST00000411381 104 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 MTND1P21-201ENST00000412991 285 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 RPLP0P7-201ENST00000416050 667 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 USP9YP20-201ENST00000419224 558 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 AL445669.1-201ENST00000426743 755 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 RPL7L1P10-201ENST00000427790 463 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms