Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC008993.2-201ENST00000631744 806 ntBASIC3.04□□□□□ -1.92
VCPP55072 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.04□□□□□ -1.92
VCPP55072 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
VCPP55072 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
VCPP55072 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VCPP55072 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.04□□□□□ -1.92
VCPP55072 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VCPP55072 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.03□□□□□ -1.92
VCPP55072 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VCPP55072 SNORA4.1-201ENST00000364263 144 ntBASIC3.03□□□□□ -1.92
VCPP55072 RNU6-343P-201ENST00000364709 104 ntBASIC3.03□□□□□ -1.92
VCPP55072 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
VCPP55072 MIR34A-201ENST00000385130 110 ntBASIC3.03□□□□□ -1.92
VCPP55072 RNU6-882P-201ENST00000391025 103 ntBASIC3.03□□□□□ -1.92
VCPP55072 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.03□□□□□ -1.92
VCPP55072 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.03□□□□□ -1.92
VCPP55072 HMGN2P30-201ENST00000423237 256 ntBASIC3.03□□□□□ -1.92
VCPP55072 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.03□□□□□ -1.92
VCPP55072 ARL5AP4-201ENST00000430731 512 ntBASIC3.03□□□□□ -1.92
VCPP55072 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.03□□□□□ -1.92
VCPP55072 MTND5P14-201ENST00000441481 1267 ntBASIC3.03□□□□□ -1.92
VCPP55072 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.03□□□□□ -1.92
VCPP55072 UBBP3-201ENST00000445497 241 ntBASIC3.03□□□□□ -1.92
VCPP55072 AL162389.1-201ENST00000449233 177 ntBASIC3.03□□□□□ -1.92
VCPP55072 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.03□□□□□ -1.92
VCPP55072 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.03□□□□□ -1.92
VCPP55072 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.03□□□□□ -1.92
VCPP55072 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.03□□□□□ -1.92
VCPP55072 MEMO1P3-201ENST00000459811 302 ntBASIC3.03□□□□□ -1.92
VCPP55072 SETP11-201ENST00000473027 690 ntBASIC3.03□□□□□ -1.92
VCPP55072 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.03□□□□□ -1.92
VCPP55072 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.03□□□□□ -1.92
VCPP55072 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
VCPP55072 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VCPP55072 HSPE1P20-201ENST00000538133 289 ntBASIC3.03□□□□□ -1.92
VCPP55072 CR383656.7-201ENST00000548164 174 ntBASIC3.03□□□□□ -1.92
VCPP55072 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.03□□□□□ -1.92
VCPP55072 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.03□□□□□ -1.92
VCPP55072 AL354943.1-201ENST00000572103 781 ntBASIC3.03□□□□□ -1.92
VCPP55072 AC090615.1-201ENST00000577519 154 ntBASIC3.03□□□□□ -1.92
VCPP55072 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.03□□□□□ -1.92
VCPP55072 AL031176.1-201ENST00000604554 466 ntBASIC3.03□□□□□ -1.92
VCPP55072 AL627309.6-201ENST00000606857 840 ntBASIC3.03□□□□□ -1.92
VCPP55072 AL020991.1-201ENST00000612314 373 ntBASIC3.03□□□□□ -1.92
VCPP55072 AL139418.1-201ENST00000613613 177 ntBASIC3.03□□□□□ -1.92
VCPP55072 Z99129.2-201ENST00000619967 314 ntBASIC3.03□□□□□ -1.92
VCPP55072 AC079228.1-201ENST00000624774 1049 ntBASIC3.03□□□□□ -1.92
VCPP55072 CRYM-AS1-204ENST00000637983 556 ntBASIC3.03□□□□□ -1.92
VCPP55072 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.03□□□□□ -1.92
VCPP55072 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.03□□□□□ -1.92
VCPP55072 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
VCPP55072 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.03□□□□□ -1.92
VCPP55072 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VCPP55072 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VCPP55072 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
VCPP55072 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VCPP55072 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.02□□□□□ -1.93
VCPP55072 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
VCPP55072 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VCPP55072 TAB3P1-202ENST00000452645 1634 ntBASIC3.02□□□□□ -1.93
VCPP55072 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.02□□□□□ -1.93
VCPP55072 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VCPP55072 RNU1-35P-201ENST00000362782 153 ntBASIC3.02□□□□□ -1.93
VCPP55072 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
VCPP55072 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.02□□□□□ -1.93
VCPP55072 TXNL1P1-201ENST00000429528 554 ntBASIC3.02□□□□□ -1.93
VCPP55072 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.02□□□□□ -1.93
VCPP55072 AL591719.1-201ENST00000444669 744 ntBASIC3.02□□□□□ -1.93
VCPP55072 COX6CP2-201ENST00000444980 225 ntBASIC3.02□□□□□ -1.93
VCPP55072 IFNA11P-201ENST00000446352 526 ntBASIC3.02□□□□□ -1.93
VCPP55072 EEF1E1P1-201ENST00000446998 430 ntBASIC3.02□□□□□ -1.93
VCPP55072 AC002381.1-201ENST00000447049 280 ntBASIC3.02□□□□□ -1.93
VCPP55072 AC010099.1-201ENST00000455434 375 ntBASIC3.02□□□□□ -1.93
VCPP55072 snoU13.23-201ENST00000458863 104 ntBASIC3.02□□□□□ -1.93
VCPP55072 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.02□□□□□ -1.93
VCPP55072 RN7SL499P-201ENST00000481141 276 ntBASIC3.02□□□□□ -1.93
VCPP55072 AC093677.1-201ENST00000514414 678 ntBASIC3.02□□□□□ -1.93
VCPP55072 RNA5SP76-201ENST00000516277 87 ntBASIC3.02□□□□□ -1.93
VCPP55072 RN7SKP287-201ENST00000516546 266 ntBASIC3.02□□□□□ -1.93
VCPP55072 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.02□□□□□ -1.93
VCPP55072 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.02□□□□□ -1.93
VCPP55072 OR6C7P-201ENST00000547875 934 ntBASIC3.02□□□□□ -1.93
VCPP55072 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VCPP55072 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.02□□□□□ -1.93
VCPP55072 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.02□□□□□ -1.93
VCPP55072 BBIP1P1-201ENST00000602999 279 ntBASIC3.02□□□□□ -1.93
VCPP55072 AL596327.1-201ENST00000603629 213 ntBASIC3.02□□□□□ -1.93
VCPP55072 DUXAP11-201ENST00000603858 526 ntBASIC3.02□□□□□ -1.93
VCPP55072 AL031281.1-201ENST00000604049 488 ntBASIC3.02□□□□□ -1.93
VCPP55072 AC093424.1-201ENST00000604999 338 ntBASIC3.02□□□□□ -1.93
VCPP55072 AC079395.3-201ENST00000615161 484 ntBASIC3.02□□□□□ -1.93
VCPP55072 AL136981.2-201ENST00000617319 734 ntBASIC3.02□□□□□ -1.93
VCPP55072 AC010338.1-201ENST00000621823 717 ntBASIC3.02□□□□□ -1.93
VCPP55072 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VCPP55072 RNA5SP139-201ENST00000364340 117 ntBASIC3.01□□□□□ -1.93
VCPP55072 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.01□□□□□ -1.93
VCPP55072 RNU6-851P-201ENST00000384565 107 ntBASIC3.01□□□□□ -1.93
VCPP55072 MIR764-201ENST00000390811 85 ntBASIC3.01□□□□□ -1.93
VCPP55072 AL360182.1-201ENST00000397433 468 ntBASIC3.01□□□□□ -1.93
VCPP55072 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms