Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC021146.2-201ENST00000504736 556 ntBASIC1.25□□□□□ -2.21
SNCAP37840 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.25□□□□□ -2.21
SNCAP37840 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.25□□□□□ -2.21
SNCAP37840 AC092470.1-201ENST00000546187 132 ntBASIC1.25□□□□□ -2.21
SNCAP37840 AL160236.1-201ENST00000556317 195 ntBASIC1.25□□□□□ -2.21
SNCAP37840 MIR4529-201ENST00000578110 78 ntBASIC1.25□□□□□ -2.21
SNCAP37840 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.25□□□□□ -2.21
SNCAP37840 NRBF2P1-201ENST00000587407 859 ntBASIC1.25□□□□□ -2.21
SNCAP37840 BX248123.2-201ENST00000606318 124 ntBASIC1.25□□□□□ -2.21
SNCAP37840 AC009318.2-201ENST00000610917 651 ntBASIC1.25□□□□□ -2.21
SNCAP37840 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SNCAP37840 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SNCAP37840 UBE2L2-201ENST00000254302 429 ntBASIC1.24□□□□□ -2.21
SNCAP37840 RNU4-31P-201ENST00000384211 141 ntBASIC1.24□□□□□ -2.21
SNCAP37840 MIR1304-201ENST00000408243 91 ntBASIC1.24□□□□□ -2.21
SNCAP37840 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.24□□□□□ -2.21
SNCAP37840 OR51A3P-201ENST00000413596 924 ntBASIC1.24□□□□□ -2.21
SNCAP37840 CYCSP48-201ENST00000417124 323 ntBASIC1.24□□□□□ -2.21
SNCAP37840 AC007098.1-201ENST00000420122 367 ntBASIC1.24□□□□□ -2.21
SNCAP37840 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SNCAP37840 BX510359.4-201ENST00000423750 193 ntBASIC1.24□□□□□ -2.21
SNCAP37840 AC090774.1-201ENST00000435925 246 ntBASIC1.24□□□□□ -2.21
SNCAP37840 Z82190.1-201ENST00000454534 490 ntBASIC1.24□□□□□ -2.21
SNCAP37840 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.24□□□□□ -2.21
SNCAP37840 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.24□□□□□ -2.21
SNCAP37840 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SNCAP37840 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.24□□□□□ -2.21
SNCAP37840 PCNAP1-201ENST00000505363 709 ntBASIC1.24□□□□□ -2.21
SNCAP37840 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.24□□□□□ -2.21
SNCAP37840 AC008885.2-201ENST00000509506 930 ntBASIC1.24□□□□□ -2.21
SNCAP37840 RNU6-928P-201ENST00000516876 104 ntBASIC1.24□□□□□ -2.21
SNCAP37840 snoZ278.1-201ENST00000517059 112 ntBASIC1.24□□□□□ -2.21
SNCAP37840 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.24□□□□□ -2.21
SNCAP37840 AP005597.4-201ENST00000526762 229 ntBASIC1.24□□□□□ -2.21
SNCAP37840 OR5AL2P-201ENST00000532185 920 ntBASIC1.24□□□□□ -2.21
SNCAP37840 AC024224.1-201ENST00000538284 609 ntBASIC1.24□□□□□ -2.21
SNCAP37840 MTCYBP23-201ENST00000558717 1102 ntBASIC1.24□□□□□ -2.21
SNCAP37840 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.24□□□□□ -2.21
SNCAP37840 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.24□□□□□ -2.21
SNCAP37840 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.24□□□□□ -2.21
SNCAP37840 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.24□□□□□ -2.21
SNCAP37840 AC025588.2-201ENST00000604851 466 ntBASIC1.24□□□□□ -2.21
SNCAP37840 AC091834.1-201ENST00000614543 472 ntBASIC1.24□□□□□ -2.21
SNCAP37840 AC109454.4-201ENST00000623411 649 ntBASIC1.24□□□□□ -2.21
SNCAP37840 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.24□□□□□ -2.21
SNCAP37840 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
SNCAP37840 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
SNCAP37840 MIR126-201ENST00000362291 85 ntBASIC1.23□□□□□ -2.21
SNCAP37840 RNA5SP276-201ENST00000362580 94 ntBASIC1.23□□□□□ -2.21
SNCAP37840 RNU4-23P-201ENST00000362839 140 ntBASIC1.23□□□□□ -2.21
SNCAP37840 RNA5SP27-201ENST00000363839 119 ntBASIC1.23□□□□□ -2.21
SNCAP37840 RNU6-1328P-201ENST00000410938 106 ntBASIC1.23□□□□□ -2.21
SNCAP37840 TATDN1P1-201ENST00000414123 891 ntBASIC1.23□□□□□ -2.21
SNCAP37840 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.23□□□□□ -2.21
SNCAP37840 VN1R36P-201ENST00000414936 291 ntBASIC1.23□□□□□ -2.21
SNCAP37840 RPL27AP8-201ENST00000424277 446 ntBASIC1.23□□□□□ -2.21
SNCAP37840 AL160175.1-201ENST00000428124 247 ntBASIC1.23□□□□□ -2.21
SNCAP37840 VN1R108P-201ENST00000431580 830 ntBASIC1.23□□□□□ -2.21
SNCAP37840 SSXP1-201ENST00000453640 473 ntBASIC1.23□□□□□ -2.21
SNCAP37840 AC008481.1-201ENST00000463278 396 ntBASIC1.23□□□□□ -2.21
SNCAP37840 UBL5P3-201ENST00000475112 231 ntBASIC1.23□□□□□ -2.21
SNCAP37840 TRBV1-201ENST00000476502 284 ntBASIC1.23□□□□□ -2.21
SNCAP37840 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.23□□□□□ -2.21
SNCAP37840 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.23□□□□□ -2.21
SNCAP37840 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
SNCAP37840 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SNCAP37840 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.23□□□□□ -2.21
SNCAP37840 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.23□□□□□ -2.21
SNCAP37840 POLR2KP1-201ENST00000553226 168 ntBASIC1.23□□□□□ -2.21
SNCAP37840 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.23□□□□□ -2.21
SNCAP37840 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.23□□□□□ -2.21
SNCAP37840 FAM60CP-201ENST00000591086 664 ntBASIC1.23□□□□□ -2.21
SNCAP37840 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.23□□□□□ -2.21
SNCAP37840 ZNF702P-202ENST00000434269 1966 ntBASIC1.23□□□□□ -2.21
SNCAP37840 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SNCAP37840 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.22□□□□□ -2.21
SNCAP37840 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.22□□□□□ -2.21
SNCAP37840 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SNCAP37840 MIR504-201ENST00000385065 83 ntBASIC1.22□□□□□ -2.21
SNCAP37840 MIR517C-201ENST00000385103 95 ntBASIC1.22□□□□□ -2.21
SNCAP37840 RNU6-821P-201ENST00000390995 107 ntBASIC1.22□□□□□ -2.21
SNCAP37840 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SNCAP37840 AL627390.1-201ENST00000396055 340 ntBASIC1.22□□□□□ -2.21
SNCAP37840 DSTNP4-201ENST00000399472 474 ntBASIC1.22□□□□□ -2.21
SNCAP37840 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.22□□□□□ -2.21
SNCAP37840 AC096920.1-201ENST00000423991 241 ntBASIC1.22□□□□□ -2.21
SNCAP37840 AL513185.2-201ENST00000425543 193 ntBASIC1.22□□□□□ -2.21
SNCAP37840 AL445669.1-201ENST00000426743 755 ntBASIC1.22□□□□□ -2.21
SNCAP37840 MTND2P19-201ENST00000449129 1012 ntBASIC1.22□□□□□ -2.21
SNCAP37840 MTCYBP35-201ENST00000503630 1137 ntBASIC1.22□□□□□ -2.21
SNCAP37840 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.22□□□□□ -2.21
SNCAP37840 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.22□□□□□ -2.21
SNCAP37840 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.22□□□□□ -2.21
SNCAP37840 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.22□□□□□ -2.21
SNCAP37840 AL049870.4-201ENST00000555741 486 ntBASIC1.22□□□□□ -2.21
SNCAP37840 LINC00933-203ENST00000559812 219 ntBASIC1.22□□□□□ -2.21
SNCAP37840 AC008269.2-201ENST00000561915 1105 ntBASIC1.22□□□□□ -2.21
SNCAP37840 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SNCAP37840 SNORD53B-201ENST00000577887 78 ntBASIC1.22□□□□□ -2.21
SNCAP37840 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms