Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VARSP26640 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VARSP26640 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
VARSP26640 AL159987.1-201ENST00000347911 293 ntBASIC5.52□□□□□ -1.53
VARSP26640 RNU6-1301P-201ENST00000362724 104 ntBASIC5.52□□□□□ -1.53
VARSP26640 RN7SKP224-201ENST00000364140 325 ntBASIC5.52□□□□□ -1.53
VARSP26640 RNU6-926P-201ENST00000384075 107 ntBASIC5.52□□□□□ -1.53
VARSP26640 MIR130A-201ENST00000385274 89 ntBASIC5.52□□□□□ -1.53
VARSP26640 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
VARSP26640 RNU6-131P-201ENST00000391144 107 ntBASIC5.52□□□□□ -1.53
VARSP26640 RNU2-43P-201ENST00000410306 190 ntBASIC5.52□□□□□ -1.53
VARSP26640 RN7SKP114-201ENST00000410327 279 ntBASIC5.52□□□□□ -1.53
VARSP26640 AL358453.1-201ENST00000422522 250 ntBASIC5.52□□□□□ -1.53
VARSP26640 RN7SL197P-201ENST00000466981 299 ntBASIC5.52□□□□□ -1.53
VARSP26640 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.52□□□□□ -1.53
VARSP26640 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.52□□□□□ -1.53
VARSP26640 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.52□□□□□ -1.53
VARSP26640 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.52□□□□□ -1.53
VARSP26640 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.52□□□□□ -1.53
VARSP26640 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.52□□□□□ -1.53
VARSP26640 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.52□□□□□ -1.53
VARSP26640 FO393422.1-201ENST00000603908 708 ntBASIC5.52□□□□□ -1.53
VARSP26640 MIR6798-201ENST00000612887 67 ntBASIC5.52□□□□□ -1.53
VARSP26640 MTND1P7-201ENST00000632801 297 ntBASIC5.52□□□□□ -1.53
VARSP26640 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VARSP26640 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
VARSP26640 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VARSP26640 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VARSP26640 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
VARSP26640 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.52□□□□□ -1.53
VARSP26640 AC083843.2-201ENST00000568248 6253 ntBASIC5.52□□□□□ -1.53
VARSP26640 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VARSP26640 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VARSP26640 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VARSP26640 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.51□□□□□ -1.53
VARSP26640 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
VARSP26640 AL022311.1-201ENST00000623726 19416 ntBASIC5.51□□□□□ -1.53
VARSP26640 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
VARSP26640 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VARSP26640 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VARSP26640 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VARSP26640 SNORA25.1-201ENST00000362326 128 ntBASIC5.51□□□□□ -1.53
VARSP26640 RNA5SP46-201ENST00000362370 120 ntBASIC5.51□□□□□ -1.53
VARSP26640 Y_RNA.82-201ENST00000363000 102 ntBASIC5.51□□□□□ -1.53
VARSP26640 Y_RNA.92-201ENST00000363043 102 ntBASIC5.51□□□□□ -1.53
VARSP26640 RNU6-1155P-201ENST00000363554 107 ntBASIC5.51□□□□□ -1.53
VARSP26640 RNU6-263P-201ENST00000363811 107 ntBASIC5.51□□□□□ -1.53
VARSP26640 Y_RNA.235-201ENST00000364412 102 ntBASIC5.51□□□□□ -1.53
VARSP26640 Y_RNA.306-201ENST00000365015 102 ntBASIC5.51□□□□□ -1.53
VARSP26640 Y_RNA.308-201ENST00000365043 101 ntBASIC5.51□□□□□ -1.53
VARSP26640 Y_RNA.312-201ENST00000365089 102 ntBASIC5.51□□□□□ -1.53
VARSP26640 Y_RNA.322-201ENST00000365151 102 ntBASIC5.51□□□□□ -1.53
VARSP26640 RNU6-1130P-201ENST00000365434 107 ntBASIC5.51□□□□□ -1.53
VARSP26640 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.51□□□□□ -1.53
VARSP26640 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.51□□□□□ -1.53
VARSP26640 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VARSP26640 RNU4-30P-201ENST00000410245 143 ntBASIC5.51□□□□□ -1.53
VARSP26640 RNU4-34P-201ENST00000410431 124 ntBASIC5.51□□□□□ -1.53
VARSP26640 Y_RNA.650-201ENST00000459002 102 ntBASIC5.51□□□□□ -1.53
VARSP26640 RPS23P2-201ENST00000463671 415 ntBASIC5.51□□□□□ -1.53
VARSP26640 TOMM22P6-201ENST00000465035 409 ntBASIC5.51□□□□□ -1.53
VARSP26640 RPS26P39-201ENST00000469206 341 ntBASIC5.51□□□□□ -1.53
VARSP26640 RPS26P21-201ENST00000475397 348 ntBASIC5.51□□□□□ -1.53
VARSP26640 Y_RNA.777-201ENST00000516982 102 ntBASIC5.51□□□□□ -1.53
VARSP26640 AC021678.3-201ENST00000517893 476 ntBASIC5.51□□□□□ -1.53
VARSP26640 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.51□□□□□ -1.53
VARSP26640 AC090617.3-201ENST00000573670 475 ntBASIC5.51□□□□□ -1.53
VARSP26640 FAM60BP-201ENST00000578364 658 ntBASIC5.51□□□□□ -1.53
VARSP26640 MIR1273C-201ENST00000578669 77 ntBASIC5.51□□□□□ -1.53
VARSP26640 MIR4505-201ENST00000582238 73 ntBASIC5.51□□□□□ -1.53
VARSP26640 Y_RNA.771-201ENST00000598668 102 ntBASIC5.51□□□□□ -1.53
VARSP26640 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.51□□□□□ -1.53
VARSP26640 AP005431.1-201ENST00000618479 319 ntBASIC5.51□□□□□ -1.53
VARSP26640 Y_RNA.789-201ENST00000622480 102 ntBASIC5.51□□□□□ -1.53
VARSP26640 AC018445.2-201ENST00000622987 260 ntBASIC5.51□□□□□ -1.53
VARSP26640 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.51□□□□□ -1.53
VARSP26640 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
VARSP26640 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VARSP26640 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
VARSP26640 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VARSP26640 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VARSP26640 SAGE2P-201ENST00000420011 2126 ntBASIC5.51□□□□□ -1.53
VARSP26640 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.51□□□□□ -1.53
VARSP26640 AC104964.3-201ENST00000606115 2860 ntBASIC5.51□□□□□ -1.53
VARSP26640 AC083899.1-201ENST00000454465 3819 ntBASIC5.51□□□□□ -1.53
VARSP26640 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
VARSP26640 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.51□□□□□ -1.53
VARSP26640 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VARSP26640 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VARSP26640 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VARSP26640 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.5□□□□□ -1.53
VARSP26640 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.5□□□□□ -1.53
VARSP26640 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VARSP26640 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
VARSP26640 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
VARSP26640 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VARSP26640 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VARSP26640 Y_RNA.441-201ENST00000384123 112 ntBASIC5.5□□□□□ -1.53
VARSP26640 CYCSP10-201ENST00000417973 294 ntBASIC5.5□□□□□ -1.53
VARSP26640 AL355433.1-201ENST00000422804 300 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms