Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 EIF4EP3-201ENST00000498782 656 ntBASIC4.09□□□□□ -1.76
POLR2AP24928 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.09□□□□□ -1.76
POLR2AP24928 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.09□□□□□ -1.76
POLR2AP24928 RN7SKP283-201ENST00000517197 270 ntBASIC4.09□□□□□ -1.76
POLR2AP24928 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.09□□□□□ -1.76
POLR2AP24928 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.09□□□□□ -1.76
POLR2AP24928 AC103710.3-201ENST00000608157 948 ntBASIC4.09□□□□□ -1.76
POLR2AP24928 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.09□□□□□ -1.76
POLR2AP24928 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.09□□□□□ -1.76
POLR2AP24928 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.09□□□□□ -1.76
POLR2AP24928 AL445437.1-201ENST00000623157 3087 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
POLR2AP24928 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
POLR2AP24928 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.08□□□□□ -1.76
POLR2AP24928 Y_RNA.46-201ENST00000362695 102 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 Y_RNA.112-201ENST00000363250 102 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 SNORA33.2-201ENST00000365413 134 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 Y_RNA.356-201ENST00000365475 113 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 RNU6-744P-201ENST00000365557 107 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
POLR2AP24928 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.08□□□□□ -1.76
POLR2AP24928 RNU1-39P-201ENST00000383897 165 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 RNU6-1029P-201ENST00000384109 107 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 RNU6-1316P-201ENST00000384242 108 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.08□□□□□ -1.76
POLR2AP24928 MIR548P-201ENST00000408336 84 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 MTCYBP8-201ENST00000422855 651 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 EZH2P1-201ENST00000431167 291 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 GPM6BP2-201ENST00000432046 144 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 HLA-N-201ENST00000437516 135 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 GPM6BP1-201ENST00000446387 144 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 AC002381.1-201ENST00000447049 280 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.08□□□□□ -1.76
POLR2AP24928 AC012181.1-201ENST00000479895 423 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.08□□□□□ -1.76
POLR2AP24928 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.08□□□□□ -1.76
POLR2AP24928 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.08□□□□□ -1.76
POLR2AP24928 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
POLR2AP24928 CYP4A43P-201ENST00000568156 121 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.08□□□□□ -1.76
POLR2AP24928 AC010525.2-201ENST00000590920 195 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 AP003355.3-201ENST00000623465 114 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
POLR2AP24928 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
POLR2AP24928 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.08□□□□□ -1.76
POLR2AP24928 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
POLR2AP24928 AC010329.2-201ENST00000595195 2737 ntBASIC4.08□□□□□ -1.76
POLR2AP24928 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
POLR2AP24928 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
POLR2AP24928 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
POLR2AP24928 Y_RNA.100-201ENST00000363141 102 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 Y_RNA.387-201ENST00000383918 102 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 RNU6-606P-201ENST00000384721 111 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
POLR2AP24928 HMGB1P11-201ENST00000413899 637 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.07□□□□□ -1.76
POLR2AP24928 AL049734.2-201ENST00000441066 616 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 HMGB1P15-201ENST00000453854 435 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 AP000942.1-201ENST00000463969 747 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 RN7SL429P-201ENST00000479090 223 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 RN7SL489P-201ENST00000486185 223 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 RN7SL327P-201ENST00000488659 223 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 RPS15AP36-201ENST00000492022 382 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.07□□□□□ -1.76
POLR2AP24928 AC104986.1-201ENST00000517978 436 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.07□□□□□ -1.76
POLR2AP24928 AP005597.4-201ENST00000526762 229 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 AC020661.2-201ENST00000560114 134 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.07□□□□□ -1.76
POLR2AP24928 AC098848.2-201ENST00000588023 330 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 IGHV3-29-201ENST00000604817 344 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.07□□□□□ -1.76
POLR2AP24928 AC040896.1-201ENST00000613819 479 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 AL122125.1-201ENST00000616999 600 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 RN7SL853P-201ENST00000617250 223 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
POLR2AP24928 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
POLR2AP24928 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
POLR2AP24928 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
POLR2AP24928 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.07□□□□□ -1.76
POLR2AP24928 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
POLR2AP24928 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
POLR2AP24928 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
POLR2AP24928 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
POLR2AP24928 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
POLR2AP24928 RNU6-343P-201ENST00000364709 104 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 RNU6-301P-201ENST00000384277 107 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 MIR513A2-201ENST00000385249 127 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 AL592114.1-201ENST00000403842 483 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 RN7SKP111-201ENST00000410349 271 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 VN1R36P-201ENST00000414936 291 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.07□□□□□ -1.76
POLR2AP24928 Z82205.1-201ENST00000428456 297 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.07□□□□□ -1.76
POLR2AP24928 TRBV26-201ENST00000456572 344 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.07□□□□□ -1.76
POLR2AP24928 SNRPGP18-201ENST00000553000 214 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 SNORD39.3-201ENST00000584451 71 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms