Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.03□□□□□ -2.08
COL5A1P20908 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.03□□□□□ -2.08
COL5A1P20908 VN1R83P-201ENST00000595685 445 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.03□□□□□ -2.08
COL5A1P20908 AC013444.2-201ENST00000603317 787 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 AC069545.1-201ENST00000605671 358 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 AL355816.1-201ENST00000607951 118 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 AC091834.1-201ENST00000614543 472 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
COL5A1P20908 MTND4P31-201ENST00000425607 1343 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 ZNF271P-202ENST00000465539 1970 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 RNA5SP295-201ENST00000362655 121 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 RNU6-457P-201ENST00000363999 107 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 SNORD116-1-201ENST00000384335 95 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 SNORA40.18-201ENST00000391200 128 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 RNU6-1140P-201ENST00000410517 106 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.03□□□□□ -2.09
COL5A1P20908 TRGV6-201ENST00000417928 299 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 PAICSP7-201ENST00000419829 962 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.03□□□□□ -2.09
COL5A1P20908 AL445685.2-201ENST00000422551 342 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.03□□□□□ -2.09
COL5A1P20908 RPS6P15-201ENST00000431996 751 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
COL5A1P20908 RPS7P5-201ENST00000441482 581 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 AC093392.2-201ENST00000450682 337 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 AC233279.1-201ENST00000455300 423 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 AC087190.1-201ENST00000484462 480 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 KLRA1P-201ENST00000503499 986 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 AC108078.2-201ENST00000510750 236 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 AC008837.2-201ENST00000513076 418 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 RNU6-416P-201ENST00000516265 103 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.03□□□□□ -2.09
COL5A1P20908 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.03□□□□□ -2.09
COL5A1P20908 AP003385.6-201ENST00000531603 374 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 AC090751.1-201ENST00000566966 267 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.03□□□□□ -2.09
COL5A1P20908 AL109653.1-201ENST00000603091 248 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 RPL23AP88-201ENST00000605759 454 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 AC055764.2-201ENST00000610089 670 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 AC121761.2-201ENST00000617300 689 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 U6.107-201ENST00000637108 79 ntBASIC2.03□□□□□ -2.09
COL5A1P20908 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL5A1P20908 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
COL5A1P20908 OR1L1-202ENST00000373686 1083 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.02□□□□□ -2.09
COL5A1P20908 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
COL5A1P20908 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.02□□□□□ -2.09
COL5A1P20908 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.02□□□□□ -2.09
COL5A1P20908 MTCO1P3-201ENST00000429327 192 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 NEK4P1-201ENST00000433383 879 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 AL118520.1-201ENST00000450770 291 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 RPL21P134-201ENST00000453468 483 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 RNU7-125P-201ENST00000458760 62 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.02□□□□□ -2.09
COL5A1P20908 MTCYBP16-201ENST00000509187 1129 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 AC010486.3-201ENST00000511602 785 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 RNA5SP480-201ENST00000516840 109 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.02□□□□□ -2.09
COL5A1P20908 AC087373.1-201ENST00000524920 491 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
COL5A1P20908 AL356057.1-201ENST00000533798 831 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 AC005832.3-201ENST00000537929 631 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 ELOCP32-201ENST00000548625 324 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 MTCO1P40-201ENST00000574371 625 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.02□□□□□ -2.09
COL5A1P20908 RNA5SP108-201ENST00000605921 117 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 AC097065.2-201ENST00000608159 533 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 AP005137.2-201ENST00000609238 400 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.02□□□□□ -2.09
COL5A1P20908 AP003399.1-201ENST00000637534 361 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 ZNF663P-202ENST00000641770 1131 ntBASIC2.02□□□□□ -2.09
COL5A1P20908 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL5A1P20908 AC025263.3-201ENST00000622965 1396 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
COL5A1P20908 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.01□□□□□ -2.09
COL5A1P20908 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
COL5A1P20908 HMGB1P5-201ENST00000255320 642 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 Y_RNA.192-201ENST00000363977 102 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 RNU4-40P-201ENST00000364351 143 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 RNU6-619P-201ENST00000365146 108 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 SNORD116-2-201ENST00000384274 95 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 SNORD116-6-201ENST00000384711 96 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 MIR591-201ENST00000385290 95 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 AL356131.1-201ENST00000405826 414 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A1P20908 USP9YP26-201ENST00000421008 661 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A1P20908 AC011233.1-201ENST00000422812 283 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 AC009965.2-201ENST00000425328 970 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 RPL23AP16-201ENST00000441715 421 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A1P20908 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A1P20908 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A1P20908 ATG12P2-201ENST00000456830 416 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 NF1P3-201ENST00000457709 450 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 AC005410.1-202ENST00000460347 485 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms