Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 HSPE1P20-201ENST00000538133 289 ntBASIC4.95□□□□□ -1.62
PDGFAP04085 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.95□□□□□ -1.62
PDGFAP04085 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.95□□□□□ -1.62
PDGFAP04085 AL390123.1-201ENST00000603216 237 ntBASIC4.95□□□□□ -1.62
PDGFAP04085 RAC1P9-201ENST00000604990 392 ntBASIC4.95□□□□□ -1.62
PDGFAP04085 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PDGFAP04085 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PDGFAP04085 AC010615.1-201ENST00000594254 1764 ntBASIC4.95□□□□□ -1.62
PDGFAP04085 AL731566.1-201ENST00000620490 1937 ntBASIC4.95□□□□□ -1.62
PDGFAP04085 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PDGFAP04085 AC116096.1-201ENST00000566804 2314 ntBASIC4.95□□□□□ -1.62
PDGFAP04085 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
PDGFAP04085 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDGFAP04085 AC025031.4-201ENST00000621248 3271 ntBASIC4.94□□□□□ -1.62
PDGFAP04085 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFAP04085 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.94□□□□□ -1.62
PDGFAP04085 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFAP04085 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFAP04085 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
PDGFAP04085 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFAP04085 Y_RNA.222-201ENST00000364264 102 ntBASIC4.94□□□□□ -1.62
PDGFAP04085 RNU6-827P-201ENST00000365553 106 ntBASIC4.94□□□□□ -1.62
PDGFAP04085 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PDGFAP04085 AL022722.2-201ENST00000402519 180 ntBASIC4.94□□□□□ -1.62
PDGFAP04085 ELOCP20-201ENST00000422460 345 ntBASIC4.94□□□□□ -1.62
PDGFAP04085 ARL5AP4-201ENST00000430731 512 ntBASIC4.94□□□□□ -1.62
PDGFAP04085 AC087650.1-201ENST00000431445 468 ntBASIC4.94□□□□□ -1.62
PDGFAP04085 MYL8P-204ENST00000431574 518 ntBASIC4.94□□□□□ -1.62
PDGFAP04085 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.94□□□□□ -1.62
PDGFAP04085 FCF1P4-201ENST00000448326 183 ntBASIC4.94□□□□□ -1.62
PDGFAP04085 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFAP04085 SNORD127-201ENST00000458892 86 ntBASIC4.94□□□□□ -1.62
PDGFAP04085 AC010285.1-201ENST00000470580 392 ntBASIC4.94□□□□□ -1.62
PDGFAP04085 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.94□□□□□ -1.62
PDGFAP04085 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.94□□□□□ -1.62
PDGFAP04085 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.94□□□□□ -1.62
PDGFAP04085 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.94□□□□□ -1.62
PDGFAP04085 AL133481.2-203ENST00000607558 139 ntBASIC4.94□□□□□ -1.62
PDGFAP04085 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.94□□□□□ -1.62
PDGFAP04085 AL159153.1-201ENST00000619688 317 ntBASIC4.94□□□□□ -1.62
PDGFAP04085 AC138627.2-201ENST00000624202 601 ntBASIC4.94□□□□□ -1.62
PDGFAP04085 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PDGFAP04085 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFAP04085 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFAP04085 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFAP04085 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFAP04085 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.94□□□□□ -1.62
PDGFAP04085 MTND5P9-201ENST00000503854 1755 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFAP04085 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
PDGFAP04085 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFAP04085 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFAP04085 AC099654.2-201ENST00000433031 1980 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
PDGFAP04085 RNU6-770P-201ENST00000363929 105 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 RNU6-595P-201ENST00000363944 107 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 SNORD14B-201ENST00000364533 90 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PDGFAP04085 SNORA69.1-201ENST00000390904 137 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.93□□□□□ -1.62
PDGFAP04085 Y_RNA.623-201ENST00000411128 95 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 AL627311.1-201ENST00000431514 115 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 TMEM183AP1-205ENST00000432739 290 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.93□□□□□ -1.62
PDGFAP04085 AC104634.1-201ENST00000452720 462 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 RNU6-1256P-201ENST00000516539 103 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 RNA5SP290-201ENST00000517133 127 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 AC109479.2-201ENST00000517842 174 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFAP04085 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.93□□□□□ -1.62
PDGFAP04085 AC024940.3-201ENST00000538551 316 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.93□□□□□ -1.62
PDGFAP04085 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.93□□□□□ -1.62
PDGFAP04085 MIR5701-3-201ENST00000578890 82 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 MIR5701-1-201ENST00000585138 82 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
PDGFAP04085 AC011447.4-201ENST00000587562 111 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 MIR8076-201ENST00000611401 83 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 MIR378J-201ENST00000611988 109 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 MIR5701-2-201ENST00000615634 82 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 AC087385.3-201ENST00000620477 187 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.93□□□□□ -1.62
PDGFAP04085 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.93□□□□□ -1.62
PDGFAP04085 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFAP04085 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.93□□□□□ -1.62
PDGFAP04085 MAPK10-349ENST00000641767 3661 ntBASIC4.93□□□□□ -1.62
PDGFAP04085 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFAP04085 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFAP04085 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFAP04085 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFAP04085 AC104623.2-202ENST00000623477 4002 ntBASIC4.92□□□□□ -1.62
PDGFAP04085 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFAP04085 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFAP04085 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFAP04085 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.92□□□□□ -1.62
PDGFAP04085 AC007685.1-201ENST00000329806 452 ntBASIC4.92□□□□□ -1.62
PDGFAP04085 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFAP04085 MT-TW-201ENST00000387382 68 ntBASIC4.92□□□□□ -1.62
PDGFAP04085 RPL11P3-201ENST00000395256 523 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms