Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
HLA-DQA1P01909 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
HLA-DQA1P01909 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.07□□□□□ -2.08
HLA-DQA1P01909 AL049641.1-201ENST00000441055 1948 ntBASIC2.07□□□□□ -2.08
HLA-DQA1P01909 AC007785.2-201ENST00000598627 1916 ntBASIC2.07□□□□□ -2.08
HLA-DQA1P01909 MTND5P33-201ENST00000571250 1450 ntBASIC2.07□□□□□ -2.08
HLA-DQA1P01909 SDAD1P2-201ENST00000441308 2028 ntBASIC2.07□□□□□ -2.08
HLA-DQA1P01909 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DQA1P01909 AL049781.1-201ENST00000623195 3585 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 RPL21P132-201ENST00000331267 462 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 RNU1-100P-201ENST00000365255 165 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 RNU6-1027P-201ENST00000383998 107 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 RNU6-432P-201ENST00000384196 109 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 RNU6-1035P-201ENST00000384477 107 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AL590084.2-201ENST00000401481 382 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AL109755.1-201ENST00000401791 649 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AL356057.2-201ENST00000403318 432 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 CCNG1P1-201ENST00000406783 885 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 RN7SKP220-201ENST00000410611 288 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 Z85995.1-201ENST00000415547 335 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AL645937.1-202ENST00000421799 937 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AC129850.1-201ENST00000436203 508 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AL714022.1-201ENST00000439897 151 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 CBWD4P-201ENST00000445695 655 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 BX510359.1-201ENST00000456973 237 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 RN7SL807P-201ENST00000470923 297 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AC117440.1-201ENST00000474107 571 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AC116337.2-201ENST00000477662 156 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AC034222.1-201ENST00000494052 532 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AC022447.3-201ENST00000506865 495 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AP002748.2-201ENST00000528671 348 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 HMGB1P6-201ENST00000569046 646 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 MIR4444-1-201ENST00000581696 74 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 MIR544B-201ENST00000582372 78 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 MIR4444-2-201ENST00000584390 74 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AL031281.1-201ENST00000604049 488 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AC019159.1-201ENST00000605094 187 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AC072039.2-201ENST00000608883 439 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AL161629.2-201ENST00000615347 275 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AC010133.1-201ENST00000615809 842 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AC002064.3-201ENST00000623448 346 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AC026422.1-201ENST00000623961 452 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AC103706.2-201ENST00000638080 240 ntBASIC2.06□□□□□ -2.08
HLA-DQA1P01909 AL355596.1-201ENST00000565399 3996 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 SNORD113-6-201ENST00000363345 75 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 RNU6-931P-201ENST00000363850 107 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 RNA5SP88-201ENST00000365560 109 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 TXNP7-201ENST00000406296 293 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 SNORA11-201ENST00000408789 128 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AL359704.1-201ENST00000411586 781 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 HMGB1P49-201ENST00000418882 569 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AC099548.1-201ENST00000421443 426 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AC092047.1-201ENST00000424997 240 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AL590383.1-201ENST00000428602 75 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AC007919.1-201ENST00000429380 217 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 MTND1P20-201ENST00000430341 950 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 BNIP3P2-201ENST00000441221 577 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 RPS29P12-201ENST00000460178 152 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AP000852.1-201ENST00000472460 573 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 RN7SL504P-201ENST00000494496 287 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AC104685.1-201ENST00000502445 371 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 DSTNP2-201ENST00000504533 515 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 RNA5SP216-201ENST00000516111 123 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms