Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RPS24P6-201ENST00000452670 400 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.26□□□□□ -1.73
CNOT4O95628 snoU13.4-201ENST00000458916 104 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 MTATP8P1-201ENST00000467115 207 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.26□□□□□ -1.73
CNOT4O95628 SCARNA22-201ENST00000503991 125 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CNOT4O95628 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.26□□□□□ -1.73
CNOT4O95628 RN7SKP46-201ENST00000515942 234 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 RNA5SP392-201ENST00000516905 112 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 RNU6-1092P-201ENST00000516955 87 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.26□□□□□ -1.73
CNOT4O95628 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.26□□□□□ -1.73
CNOT4O95628 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.26□□□□□ -1.73
CNOT4O95628 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.26□□□□□ -1.73
CNOT4O95628 MIR4293-201ENST00000584305 78 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNOT4O95628 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.26□□□□□ -1.73
CNOT4O95628 AL669831.3-213ENST00000636676 183 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.26□□□□□ -1.73
CNOT4O95628 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CNOT4O95628 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.26□□□□□ -1.73
CNOT4O95628 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNOT4O95628 AC125257.1-201ENST00000560400 2930 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.25□□□□□ -1.73
CNOT4O95628 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CNOT4O95628 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CNOT4O95628 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CNOT4O95628 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CNOT4O95628 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CNOT4O95628 RNU6-50P-201ENST00000362356 103 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 Y_RNA.135-201ENST00000363439 95 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 RNU6-593P-201ENST00000364716 112 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CNOT4O95628 MT-TG-201ENST00000387429 68 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 MT-TR-201ENST00000387439 65 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 RNU6-550P-201ENST00000391057 101 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 RNA5SP332-201ENST00000391063 115 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 SOD2P1-201ENST00000396543 562 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
CNOT4O95628 RNU6-516P-201ENST00000411381 104 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.25□□□□□ -1.73
CNOT4O95628 ATG3P1-201ENST00000419507 911 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.25□□□□□ -1.73
CNOT4O95628 RPL18P10-201ENST00000425606 538 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
CNOT4O95628 AL160004.2-201ENST00000432935 350 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 RPL35AP22-201ENST00000436855 335 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 AC016831.4-201ENST00000438302 307 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 HMGB1P12-201ENST00000438594 598 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CNOT4O95628 AC104058.1-201ENST00000448028 297 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 SCARNA10-201ENST00000459255 330 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 AL591473.1-201ENST00000464297 313 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 RPL21P8-201ENST00000465083 535 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 RPL21P93-201ENST00000480465 489 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 AC026979.1-201ENST00000492525 396 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 HIGD1AP13-201ENST00000509878 289 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 RNU6-764P-201ENST00000516396 105 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 RNU6-1213P-201ENST00000517075 94 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.25□□□□□ -1.73
CNOT4O95628 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.25□□□□□ -1.73
CNOT4O95628 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.25□□□□□ -1.73
CNOT4O95628 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.25□□□□□ -1.73
CNOT4O95628 AC010653.1-201ENST00000571108 881 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.25□□□□□ -1.73
CNOT4O95628 AL020997.2-201ENST00000602607 184 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.25□□□□□ -1.73
CNOT4O95628 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.25□□□□□ -1.73
CNOT4O95628 FAM27B-201ENST00000610601 213 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.25□□□□□ -1.73
CNOT4O95628 DUSP12P1-201ENST00000612874 516 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 U4.1-201ENST00000620349 87 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 AL133383.2-201ENST00000622958 2336 ntBASIC4.25□□□□□ -1.73
CNOT4O95628 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.25□□□□□ -1.73
CNOT4O95628 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.25□□□□□ -1.73
CNOT4O95628 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
CNOT4O95628 ZNF519P1-201ENST00000449011 1626 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CNOT4O95628 ZNF807-201ENST00000328088 1707 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CNOT4O95628 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CNOT4O95628 KPNA2P1-201ENST00000458289 1591 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.24□□□□□ -1.73
CNOT4O95628 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CNOT4O95628 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 RNA5SP191-201ENST00000362585 102 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 RNU6-432P-201ENST00000384196 109 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 RNA5SP219-201ENST00000390940 113 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 U3.30-201ENST00000391308 210 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 MIR1271-201ENST00000408537 86 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 RPL30P2-201ENST00000414021 291 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CNOT4O95628 AC114482.1-201ENST00000418010 247 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 RPL36AP10-201ENST00000421785 322 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 PDSS1P1-201ENST00000422953 1114 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.24□□□□□ -1.73
CNOT4O95628 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms