Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.3□□□□□ -1.88
KDM4BO94953 MIR3939-201ENST00000582614 106 ntBASIC3.3□□□□□ -1.88
KDM4BO94953 AC098848.2-201ENST00000588023 330 ntBASIC3.3□□□□□ -1.88
KDM4BO94953 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.3□□□□□ -1.88
KDM4BO94953 AC007621.1-201ENST00000604544 437 ntBASIC3.3□□□□□ -1.88
KDM4BO94953 AP001596.2-201ENST00000608410 312 ntBASIC3.3□□□□□ -1.88
KDM4BO94953 AC093788.1-201ENST00000609356 927 ntBASIC3.3□□□□□ -1.88
KDM4BO94953 AC002553.4-201ENST00000616896 331 ntBASIC3.3□□□□□ -1.88
KDM4BO94953 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.3□□□□□ -1.88
KDM4BO94953 AC243312.2-201ENST00000623340 601 ntBASIC3.3□□□□□ -1.88
KDM4BO94953 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.3□□□□□ -1.88
KDM4BO94953 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
KDM4BO94953 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
KDM4BO94953 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
KDM4BO94953 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.3□□□□□ -1.88
KDM4BO94953 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KDM4BO94953 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KDM4BO94953 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.29□□□□□ -1.88
KDM4BO94953 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KDM4BO94953 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.29□□□□□ -1.88
KDM4BO94953 Y_RNA.89-201ENST00000363031 102 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 RNA5SP443-201ENST00000363083 132 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
KDM4BO94953 Y_RNA.573-201ENST00000384763 105 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 MIR558-201ENST00000384920 94 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 MIR1-2-201ENST00000384961 85 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 AC068050.1-201ENST00000394891 380 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 FGF7P8-201ENST00000402994 292 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 AL391417.1-201ENST00000404100 426 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 RNU2-43P-201ENST00000410306 190 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 RNU4-6P-201ENST00000410804 122 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 AL356095.1-201ENST00000417217 199 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.29□□□□□ -1.88
KDM4BO94953 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.29□□□□□ -1.88
KDM4BO94953 HMGB1P31-201ENST00000437242 427 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.29□□□□□ -1.88
KDM4BO94953 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.29□□□□□ -1.88
KDM4BO94953 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.29□□□□□ -1.88
KDM4BO94953 AL162389.1-201ENST00000449233 177 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 HMGB3P8-201ENST00000449709 577 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 AC006480.1-201ENST00000449887 378 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.29□□□□□ -1.88
KDM4BO94953 AC027673.1-201ENST00000456245 405 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 RN7SL330P-201ENST00000469709 307 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.29□□□□□ -1.88
KDM4BO94953 RPS29P25-201ENST00000481709 171 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 RPL36AP51-201ENST00000487216 318 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 RPS15AP36-201ENST00000492022 382 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 HSPD1P15-201ENST00000505573 1122 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 SNORD27.1-201ENST00000516319 72 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 RNU2-10P-201ENST00000516375 211 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 SNORA31.9-201ENST00000516429 84 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.29□□□□□ -1.88
KDM4BO94953 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.29□□□□□ -1.88
KDM4BO94953 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.29□□□□□ -1.88
KDM4BO94953 AC128657.1-201ENST00000549459 145 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 ARL2BPP2-201ENST00000550907 489 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 AL163153.1-201ENST00000554223 283 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 AC025884.1-201ENST00000556034 378 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 BNIP3P5-201ENST00000562290 498 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 AP005205.1-201ENST00000563503 508 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 HMGB1P6-201ENST00000569046 646 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.29□□□□□ -1.88
KDM4BO94953 MIR4425-201ENST00000580572 84 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.29□□□□□ -1.88
KDM4BO94953 AC067959.1-201ENST00000604334 379 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 Z84480.1-201ENST00000605131 311 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 AL592436.1-201ENST00000605135 558 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 AC004067.1-201ENST00000608733 700 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 TUG1_2.1-201ENST00000614234 87 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 AL450472.3-201ENST00000615578 367 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.29□□□□□ -1.88
KDM4BO94953 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 U6.42-201ENST00000618440 107 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 AC244100.1-202ENST00000621554 382 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 AC092628.2-201ENST00000622492 339 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.29□□□□□ -1.88
KDM4BO94953 MIR492-201ENST00000638676 116 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KDM4BO94953 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.29□□□□□ -1.88
KDM4BO94953 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
KDM4BO94953 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
KDM4BO94953 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KDM4BO94953 DDX10P1-201ENST00000448545 1933 ntBASIC3.29□□□□□ -1.88
KDM4BO94953 ZNF680P1-201ENST00000436625 1469 ntBASIC3.28□□□□□ -1.88
KDM4BO94953 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KDM4BO94953 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.28□□□□□ -1.88
KDM4BO94953 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.28□□□□□ -1.88
KDM4BO94953 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KDM4BO94953 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.28□□□□□ -1.88
KDM4BO94953 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KDM4BO94953 RNU6-283P-201ENST00000364788 107 ntBASIC3.28□□□□□ -1.88
KDM4BO94953 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.28□□□□□ -1.88
KDM4BO94953 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.28□□□□□ -1.88
KDM4BO94953 RNU6-882P-201ENST00000391025 103 ntBASIC3.28□□□□□ -1.88
KDM4BO94953 AL591034.1-201ENST00000407447 340 ntBASIC3.28□□□□□ -1.88
KDM4BO94953 RPS3AP24-201ENST00000407896 734 ntBASIC3.28□□□□□ -1.88
KDM4BO94953 RNU6-908P-201ENST00000410160 94 ntBASIC3.28□□□□□ -1.88
KDM4BO94953 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KDM4BO94953 RPL31P12-201ENST00000422587 358 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 200.1 ms