Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RNU6-927P-201ENST00000516199 100 ntBASIC3.36□□□□□ -1.87
BEST1O76090 RN7SKP60-201ENST00000516985 239 ntBASIC3.36□□□□□ -1.87
BEST1O76090 SCARNA20.6-201ENST00000517251 106 ntBASIC3.36□□□□□ -1.87
BEST1O76090 AC022616.6-201ENST00000520479 119 ntBASIC3.36□□□□□ -1.87
BEST1O76090 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.36□□□□□ -1.87
BEST1O76090 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
BEST1O76090 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.36□□□□□ -1.87
BEST1O76090 DNAJC8P1-201ENST00000554535 372 ntBASIC3.36□□□□□ -1.87
BEST1O76090 ZNF519P3-201ENST00000557158 1032 ntBASIC3.36□□□□□ -1.87
BEST1O76090 UBL5P2-201ENST00000583788 219 ntBASIC3.36□□□□□ -1.87
BEST1O76090 MIR4293-201ENST00000584305 78 ntBASIC3.36□□□□□ -1.87
BEST1O76090 AL022161.1-201ENST00000604390 213 ntBASIC3.36□□□□□ -1.87
BEST1O76090 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.36□□□□□ -1.87
BEST1O76090 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.36□□□□□ -1.87
BEST1O76090 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.36□□□□□ -1.87
BEST1O76090 AL136313.1-201ENST00000624804 202 ntBASIC3.36□□□□□ -1.87
BEST1O76090 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.36□□□□□ -1.87
BEST1O76090 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.36□□□□□ -1.87
BEST1O76090 AC007496.3-201ENST00000624987 3443 ntBASIC3.36□□□□□ -1.87
BEST1O76090 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
BEST1O76090 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.36□□□□□ -1.87
BEST1O76090 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.36□□□□□ -1.87
BEST1O76090 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
BEST1O76090 AC010680.1-201ENST00000590024 3590 ntBASIC3.35□□□□□ -1.87
BEST1O76090 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
BEST1O76090 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
BEST1O76090 RNU6-799P-201ENST00000363567 107 ntBASIC3.35□□□□□ -1.87
BEST1O76090 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
BEST1O76090 Y_RNA.608-201ENST00000410647 95 ntBASIC3.35□□□□□ -1.87
BEST1O76090 RNA5SP31-201ENST00000411144 127 ntBASIC3.35□□□□□ -1.87
BEST1O76090 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.35□□□□□ -1.87
BEST1O76090 MTND2P18-201ENST00000419962 1030 ntBASIC3.35□□□□□ -1.87
BEST1O76090 AL353678.1-201ENST00000422735 741 ntBASIC3.35□□□□□ -1.87
BEST1O76090 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.35□□□□□ -1.87
BEST1O76090 AC007919.1-201ENST00000429380 217 ntBASIC3.35□□□□□ -1.87
BEST1O76090 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.35□□□□□ -1.87
BEST1O76090 AL445567.1-201ENST00000439121 144 ntBASIC3.35□□□□□ -1.87
BEST1O76090 AC016696.1-201ENST00000446949 318 ntBASIC3.35□□□□□ -1.87
BEST1O76090 EPS15P1-201ENST00000448836 336 ntBASIC3.35□□□□□ -1.87
BEST1O76090 AL590365.1-201ENST00000450788 243 ntBASIC3.35□□□□□ -1.87
BEST1O76090 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.35□□□□□ -1.87
BEST1O76090 KATNBL1P6-201ENST00000453433 915 ntBASIC3.35□□□□□ -1.87
BEST1O76090 RPL23AP14-201ENST00000468281 468 ntBASIC3.35□□□□□ -1.87
BEST1O76090 AL160314.1-201ENST00000490836 438 ntBASIC3.35□□□□□ -1.87
BEST1O76090 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.35□□□□□ -1.87
BEST1O76090 RNU6-928P-201ENST00000516876 104 ntBASIC3.35□□□□□ -1.87
BEST1O76090 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.35□□□□□ -1.87
BEST1O76090 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
BEST1O76090 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.35□□□□□ -1.87
BEST1O76090 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
BEST1O76090 MIR5697-201ENST00000578045 78 ntBASIC3.35□□□□□ -1.87
BEST1O76090 MIR3915-201ENST00000578518 97 ntBASIC3.35□□□□□ -1.87
BEST1O76090 AC008507.1-201ENST00000587506 734 ntBASIC3.35□□□□□ -1.87
BEST1O76090 AC022146.1-201ENST00000595307 847 ntBASIC3.35□□□□□ -1.87
BEST1O76090 AP001981.2-201ENST00000603241 418 ntBASIC3.35□□□□□ -1.87
BEST1O76090 AC239868.4-201ENST00000608318 671 ntBASIC3.35□□□□□ -1.87
BEST1O76090 AC027807.2-201ENST00000616099 408 ntBASIC3.35□□□□□ -1.87
BEST1O76090 uc_338.12-201ENST00000616344 181 ntBASIC3.35□□□□□ -1.87
BEST1O76090 AC138932.5-201ENST00000617759 563 ntBASIC3.35□□□□□ -1.87
BEST1O76090 AC091953.5-201ENST00000622919 233 ntBASIC3.35□□□□□ -1.87
BEST1O76090 AC097520.1-201ENST00000624435 385 ntBASIC3.35□□□□□ -1.87
BEST1O76090 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
BEST1O76090 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
BEST1O76090 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.35□□□□□ -1.87
BEST1O76090 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
BEST1O76090 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
BEST1O76090 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
BEST1O76090 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
BEST1O76090 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
BEST1O76090 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
BEST1O76090 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.34□□□□□ -1.87
BEST1O76090 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
BEST1O76090 RNU6-270P-201ENST00000364131 105 ntBASIC3.34□□□□□ -1.87
BEST1O76090 RNU5E-5P-201ENST00000365379 116 ntBASIC3.34□□□□□ -1.87
BEST1O76090 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.34□□□□□ -1.87
BEST1O76090 AF228730.1-201ENST00000397972 663 ntBASIC3.34□□□□□ -1.87
BEST1O76090 AC007899.1-201ENST00000412776 775 ntBASIC3.34□□□□□ -1.87
BEST1O76090 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.34□□□□□ -1.87
BEST1O76090 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.34□□□□□ -1.87
BEST1O76090 RPL23AP83-201ENST00000434984 473 ntBASIC3.34□□□□□ -1.87
BEST1O76090 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.34□□□□□ -1.87
BEST1O76090 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.34□□□□□ -1.87
BEST1O76090 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.34□□□□□ -1.87
BEST1O76090 AL671855.1-201ENST00000446875 1203 ntBASIC3.34□□□□□ -1.87
BEST1O76090 GAPDHP27-201ENST00000447427 1020 ntBASIC3.34□□□□□ -1.87
BEST1O76090 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.34□□□□□ -1.87
BEST1O76090 Z99127.3-201ENST00000448158 395 ntBASIC3.34□□□□□ -1.87
BEST1O76090 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.34□□□□□ -1.87
BEST1O76090 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.34□□□□□ -1.87
BEST1O76090 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.34□□□□□ -1.87
BEST1O76090 AC087588.1-201ENST00000462203 316 ntBASIC3.34□□□□□ -1.87
BEST1O76090 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.34□□□□□ -1.87
BEST1O76090 KC877373.1-201ENST00000479066 408 ntBASIC3.34□□□□□ -1.87
BEST1O76090 RPS3AP43-201ENST00000479743 781 ntBASIC3.34□□□□□ -1.87
BEST1O76090 AC068724.1-201ENST00000487100 792 ntBASIC3.34□□□□□ -1.87
BEST1O76090 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.34□□□□□ -1.87
BEST1O76090 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.34□□□□□ -1.87
BEST1O76090 RN7SKP258-201ENST00000517151 304 ntBASIC3.34□□□□□ -1.87
BEST1O76090 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.34□□□□□ -1.87
BEST1O76090 ROCK1P1-201ENST00000573767 549 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms