Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CPNE3O75131 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
CPNE3O75131 RN7SKP104-201ENST00000362605 328 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 RNY1P16-201ENST00000363063 111 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 Y_RNA.106-201ENST00000363189 100 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 RNA5SP123-201ENST00000363244 119 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 RNA5SP455-201ENST00000365190 119 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CPNE3O75131 RN7SKP58-201ENST00000411010 305 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 RNU6-847P-201ENST00000411115 108 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CPNE3O75131 AL096701.2-201ENST00000416920 238 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.9□□□□□ -1.63
CPNE3O75131 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.9□□□□□ -1.63
CPNE3O75131 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.9□□□□□ -1.63
CPNE3O75131 SNORD108-201ENST00000459332 71 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 RNU6-1037P-201ENST00000459571 107 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.9□□□□□ -1.63
CPNE3O75131 FO393415.2-201ENST00000480085 343 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 AC083982.1-201ENST00000485679 344 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 RN7SL346P-201ENST00000491561 294 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
CPNE3O75131 RNU6-1256P-201ENST00000516539 103 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 AC012339.2-201ENST00000523996 453 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 HIGD1AP5-201ENST00000529959 259 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 MED28P6-201ENST00000558776 231 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 MIR3921-201ENST00000577308 85 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 AC233702.9-201ENST00000581528 203 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 AC100827.5-201ENST00000615883 426 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.9□□□□□ -1.63
CPNE3O75131 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.9□□□□□ -1.63
CPNE3O75131 Z73965.1-201ENST00000623412 2297 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CPNE3O75131 NCAPGP1-201ENST00000505112 1814 ntBASIC4.9□□□□□ -1.63
CPNE3O75131 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CPNE3O75131 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CPNE3O75131 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.89□□□□□ -1.63
CPNE3O75131 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CPNE3O75131 AC025031.4-201ENST00000621248 3271 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CPNE3O75131 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CPNE3O75131 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CPNE3O75131 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.89□□□□□ -1.63
CPNE3O75131 MIR412-201ENST00000362142 91 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 RNU6-37P-201ENST00000362692 107 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 Y_RNA.210-201ENST00000364161 110 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 RNU6-11P-201ENST00000364234 107 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 RNU6-7-201ENST00000364784 107 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 RNU6-8-201ENST00000365467 107 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CPNE3O75131 RNU6-25P-201ENST00000383873 107 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 RNU6-1-201ENST00000383898 107 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 RNU6-48P-201ENST00000384161 107 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 RNU6-36P-201ENST00000384172 107 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 RNU6-4P-201ENST00000384205 107 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 RNU6-5P-201ENST00000384238 107 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 RNU6-3P-201ENST00000384314 107 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 RNU6-16P-201ENST00000384385 107 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 RNU6-15P-201ENST00000384534 107 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 RNU6-2-201ENST00000384627 107 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 RNU6-29P-201ENST00000384637 107 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 RNU6-9-201ENST00000384776 107 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 RNU6-33P-201ENST00000384793 107 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 MT-TR-201ENST00000387439 65 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 RNA5SP241-201ENST00000391326 114 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 MIR1252-201ENST00000408861 65 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 RN7SKP114-201ENST00000410327 279 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.89□□□□□ -1.63
CPNE3O75131 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.89□□□□□ -1.63
CPNE3O75131 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
CPNE3O75131 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CPNE3O75131 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.89□□□□□ -1.63
CPNE3O75131 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.89□□□□□ -1.63
CPNE3O75131 RPS20P22-201ENST00000473700 357 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 RPL22P13-201ENST00000493291 347 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.89□□□□□ -1.63
CPNE3O75131 AL359273.1-201ENST00000510918 627 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.89□□□□□ -1.63
CPNE3O75131 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.89□□□□□ -1.63
CPNE3O75131 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.89□□□□□ -1.63
CPNE3O75131 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.89□□□□□ -1.63
CPNE3O75131 RN7SL290P-201ENST00000578661 300 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.89□□□□□ -1.63
CPNE3O75131 CPDP1-201ENST00000579660 283 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 MIR5188-201ENST00000583467 113 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CPNE3O75131 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.89□□□□□ -1.63
CPNE3O75131 RNU6-6P-201ENST00000606623 107 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 AC020634.1-201ENST00000608701 549 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.89□□□□□ -1.63
CPNE3O75131 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.89□□□□□ -1.63
CPNE3O75131 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
CPNE3O75131 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CPNE3O75131 AC083843.3-201ENST00000623679 2186 ntBASIC4.89□□□□□ -1.63
CPNE3O75131 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CPNE3O75131 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CPNE3O75131 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CPNE3O75131 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CPNE3O75131 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms