Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.14□□□□□ -1.59
GRIN3BO60391 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.14□□□□□ -1.59
GRIN3BO60391 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.14□□□□□ -1.59
GRIN3BO60391 UBE2DNL-203ENST00000474922 222 ntBASIC5.14□□□□□ -1.59
GRIN3BO60391 AC012181.1-201ENST00000479895 423 ntBASIC5.14□□□□□ -1.59
GRIN3BO60391 AC017037.1-201ENST00000508460 471 ntBASIC5.14□□□□□ -1.59
GRIN3BO60391 AC098591.2-201ENST00000510152 315 ntBASIC5.14□□□□□ -1.59
GRIN3BO60391 PTP4A1P4-201ENST00000512479 322 ntBASIC5.14□□□□□ -1.59
GRIN3BO60391 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.14□□□□□ -1.59
GRIN3BO60391 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.14□□□□□ -1.59
GRIN3BO60391 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.14□□□□□ -1.59
GRIN3BO60391 MIR3171-201ENST00000584270 74 ntBASIC5.14□□□□□ -1.59
GRIN3BO60391 AP001330.4-201ENST00000604350 154 ntBASIC5.14□□□□□ -1.59
GRIN3BO60391 AL031176.1-201ENST00000604554 466 ntBASIC5.14□□□□□ -1.59
GRIN3BO60391 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GRIN3BO60391 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GRIN3BO60391 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.14□□□□□ -1.59
GRIN3BO60391 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
GRIN3BO60391 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
GRIN3BO60391 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.13□□□□□ -1.59
GRIN3BO60391 API5P2-201ENST00000397055 1498 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.13□□□□□ -1.59
GRIN3BO60391 ZNF33CP-201ENST00000432492 2030 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 Y_RNA.378-201ENST00000365652 113 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 Y_RNA.422-201ENST00000384054 114 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 Y_RNA.576-201ENST00000384781 102 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
GRIN3BO60391 SOD2P1-201ENST00000396543 562 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 RNU4-65P-201ENST00000410473 140 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 BX323014.1-201ENST00000412876 237 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.13□□□□□ -1.59
GRIN3BO60391 PSMA2P3-201ENST00000429685 675 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.13□□□□□ -1.59
GRIN3BO60391 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.13□□□□□ -1.59
GRIN3BO60391 CYCSP35-201ENST00000451978 304 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 HMGB3P21-201ENST00000452483 547 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 RPL37P6-202ENST00000464216 403 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.13□□□□□ -1.59
GRIN3BO60391 Y_RNA.718-201ENST00000517110 102 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 AC103783.1-201ENST00000520506 373 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 AP000889.2-201ENST00000532684 490 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.13□□□□□ -1.59
GRIN3BO60391 CTHRC1P1-201ENST00000605383 469 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 AL008729.2-201ENST00000606393 473 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 AC090425.1-201ENST00000610007 140 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 MIR8069-1-201ENST00000616627 86 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 MIR8069-2-201ENST00000621412 86 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 FP236240.3-201ENST00000623061 327 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GRIN3BO60391 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
GRIN3BO60391 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
GRIN3BO60391 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.13□□□□□ -1.59
GRIN3BO60391 GABPAP-201ENST00000419271 1356 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
GRIN3BO60391 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.13□□□□□ -1.59
GRIN3BO60391 MAPK10-286ENST00000641208 8747 ntBASIC5.13□□□□□ -1.59
GRIN3BO60391 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GRIN3BO60391 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.13□□□□□ -1.59
GRIN3BO60391 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GRIN3BO60391 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GRIN3BO60391 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
GRIN3BO60391 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
GRIN3BO60391 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.12□□□□□ -1.59
GRIN3BO60391 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
GRIN3BO60391 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GRIN3BO60391 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GRIN3BO60391 SNORD113-7-201ENST00000363762 77 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 RNU6-188P-201ENST00000364207 107 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.12□□□□□ -1.59
GRIN3BO60391 RNU6-574P-201ENST00000384265 107 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 SNORD116-29-201ENST00000384516 83 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 MIR559-201ENST00000385188 96 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
GRIN3BO60391 MIR548K-201ENST00000408406 116 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.12□□□□□ -1.59
GRIN3BO60391 AC114491.1-201ENST00000416095 246 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 RPL7P46-201ENST00000425129 740 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 RPS3AP52-201ENST00000435639 297 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.12□□□□□ -1.59
GRIN3BO60391 RNU7-152P-201ENST00000458982 64 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.12□□□□□ -1.59
GRIN3BO60391 AC130509.1-201ENST00000464158 433 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 VN1R17P-201ENST00000472048 1090 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 AC083904.1-201ENST00000487828 231 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 AF213884.1-201ENST00000488102 463 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 RPL7P23-201ENST00000493874 747 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 TRBVA-201ENST00000498804 316 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.12□□□□□ -1.59
GRIN3BO60391 RNU6-123P-201ENST00000516163 102 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.12□□□□□ -1.59
GRIN3BO60391 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.12□□□□□ -1.59
GRIN3BO60391 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.12□□□□□ -1.59
GRIN3BO60391 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.12□□□□□ -1.59
GRIN3BO60391 ELOCP31-201ENST00000540463 467 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.12□□□□□ -1.59
GRIN3BO60391 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms