Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 OR6C73P-201ENST00000546432 358 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 BPTFP1-201ENST00000579209 492 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 AL021368.1-201ENST00000607490 540 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 AC121761.2-201ENST00000617300 689 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 AL356094.1-201ENST00000624663 1212 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 AC017104.5-201ENST00000637647 639 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 AP000553.5-201ENST00000641933 54 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 AC006026.1-201ENST00000444025 1803 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 VTRNA1-1-201ENST00000363120 99 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 RNU6-468P-201ENST00000384003 109 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 DNAJC19P6-201ENST00000401853 280 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 TMSB4XP8-201ENST00000402089 135 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 TMSB4XP6-201ENST00000415187 135 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 TMSB4XP1-201ENST00000424567 135 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 TRAPPC2P9-201ENST00000434556 343 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 AL050341.1-201ENST00000447743 313 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 DDX10P1-201ENST00000448545 1933 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 MTCO1P6-201ENST00000481192 1384 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 VPS26AP1-201ENST00000483197 979 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 AC010735.1-201ENST00000567305 1026 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 AC115085.1-201ENST00000588924 229 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 AC011712.1-201ENST00000588959 234 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 AC090617.7-201ENST00000623952 126 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 AL049737.1-201ENST00000413920 1403 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AC007256.1-201ENST00000392253 2765 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 MFSD8-213ENST00000641134 1327 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 Y_RNA.110-201ENST00000363220 99 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 RNU6-1151P-201ENST00000384684 107 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 RNU6-77P-201ENST00000410554 91 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 RNU2-32P-201ENST00000411193 191 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 RNA5SP492-201ENST00000411330 114 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AL357078.2-201ENST00000416486 427 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 MTND2P16-201ENST00000419987 799 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AC005517.2-201ENST00000424673 553 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 RNFT1P2-201ENST00000443064 757 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AC244505.5-201ENST00000443639 207 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AC011979.1-201ENST00000472300 483 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AC079203.1-201ENST00000487972 404 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 MTND5P4-201ENST00000514978 288 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 IGKV2D-36-201ENST00000518643 226 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AC083923.1-201ENST00000523708 376 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AC005776.1-201ENST00000603164 290 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AC011890.2-201ENST00000613393 294 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AC097372.4-201ENST00000625025 466 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 FAM157B-203ENST00000639350 358 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 RNU1-93P-201ENST00000364704 169 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 RNU6-452P-201ENST00000384406 107 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AL513185.2-201ENST00000425543 193 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AC096632.1-201ENST00000427395 310 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AC023424.2-201ENST00000493479 777 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 RPL30P11-201ENST00000495304 339 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 SEM1P1-201ENST00000506694 209 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AC090071.1-201ENST00000507713 644 ntBASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
COL6A6A6NMZ7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 RNU4-41P-201ENST00000364426 143 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 RNU2-72P-201ENST00000411175 163 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AC092638.1-201ENST00000411966 1275 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AC246680.2-201ENST00000422106 389 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 TPTE2P6-202ENST00000445572 1007 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AL021397.1-201ENST00000451806 248 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AC104308.1-201ENST00000454621 333 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AC015724.1-201ENST00000478577 156 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 RNU4-60P-201ENST00000517239 135 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 MIR4474-201ENST00000579189 78 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AC126365.2-201ENST00000580630 379 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms