Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
RGPD3A6NKT7 RNA5SP363-201ENST00000365072 115 ntBASIC1.72□□□□□ -2.13
RGPD3A6NKT7 SNORA40.6-201ENST00000391153 128 ntBASIC1.72□□□□□ -2.13
RGPD3A6NKT7 AL033519.2-201ENST00000403958 392 ntBASIC1.72□□□□□ -2.13
RGPD3A6NKT7 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.72□□□□□ -2.13
RGPD3A6NKT7 RPL7P18-201ENST00000478965 734 ntBASIC1.72□□□□□ -2.13
RGPD3A6NKT7 HMGB1P38-201ENST00000490557 577 ntBASIC1.72□□□□□ -2.13
RGPD3A6NKT7 MTCO2P9-201ENST00000503214 694 ntBASIC1.72□□□□□ -2.13
RGPD3A6NKT7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.72□□□□□ -2.13
RGPD3A6NKT7 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.72□□□□□ -2.13
RGPD3A6NKT7 RPL21P5-201ENST00000554662 472 ntBASIC1.72□□□□□ -2.13
RGPD3A6NKT7 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.72□□□□□ -2.13
RGPD3A6NKT7 MIR6840-201ENST00000611937 71 ntBASIC1.72□□□□□ -2.13
RGPD3A6NKT7 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.71□□□□□ -2.14
RGPD3A6NKT7 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RGPD3A6NKT7 MIR520E-201ENST00000384867 87 ntBASIC1.71□□□□□ -2.14
RGPD3A6NKT7 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.71□□□□□ -2.14
RGPD3A6NKT7 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RGPD3A6NKT7 UBE2V1P13-201ENST00000436983 439 ntBASIC1.71□□□□□ -2.14
RGPD3A6NKT7 FABP5P3-201ENST00000437960 408 ntBASIC1.71□□□□□ -2.14
RGPD3A6NKT7 MTCYBP12-201ENST00000440559 1134 ntBASIC1.71□□□□□ -2.14
RGPD3A6NKT7 AL078601.1-201ENST00000444542 271 ntBASIC1.71□□□□□ -2.14
RGPD3A6NKT7 COX6CP12-201ENST00000446748 202 ntBASIC1.71□□□□□ -2.14
RGPD3A6NKT7 MTCO1P48-201ENST00000448024 1096 ntBASIC1.71□□□□□ -2.14
RGPD3A6NKT7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.71□□□□□ -2.14
RGPD3A6NKT7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.71□□□□□ -2.14
RGPD3A6NKT7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.71□□□□□ -2.14
RGPD3A6NKT7 ANP32BP3-201ENST00000559213 706 ntBASIC1.71□□□□□ -2.14
RGPD3A6NKT7 RNU6-1331P-201ENST00000363658 106 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 RNU6-1181P-201ENST00000384191 106 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 MIR17-201ENST00000385012 84 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 U3.40-201ENST00000408706 208 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 RNU2-40P-201ENST00000410833 196 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.7□□□□□ -2.14
RGPD3A6NKT7 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC1.7□□□□□ -2.14
RGPD3A6NKT7 NCOR1P1-202ENST00000486162 291 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 AC105914.1-201ENST00000511798 226 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 AP004607.1-201ENST00000524456 203 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 AP005435.4-201ENST00000529514 284 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.7□□□□□ -2.14
RGPD3A6NKT7 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.7□□□□□ -2.14
RGPD3A6NKT7 AC013553.2-201ENST00000604244 589 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 MIR98-201ENST00000606724 119 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RGPD3A6NKT7 AC096656.1-201ENST00000623826 1364 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 RNA5SP38-201ENST00000410750 119 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 AC244033.1-201ENST00000426826 870 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 RABEPKP1-201ENST00000440529 1026 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 PGBD4P3-201ENST00000440731 581 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.7□□□□□ -2.14
RGPD3A6NKT7 RFC5P1-201ENST00000454419 874 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.7□□□□□ -2.14
RGPD3A6NKT7 AC008837.2-201ENST00000513076 418 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 RN7SKP277-201ENST00000516895 283 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 RNU6-1073P-201ENST00000517182 106 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.7□□□□□ -2.14
RGPD3A6NKT7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.7□□□□□ -2.14
RGPD3A6NKT7 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.7□□□□□ -2.14
RGPD3A6NKT7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.7□□□□□ -2.14
RGPD3A6NKT7 AC097504.2-201ENST00000608088 454 ntBASIC1.7□□□□□ -2.14
RGPD3A6NKT7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.7□□□□□ -2.14
RGPD3A6NKT7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RGPD3A6NKT7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RGPD3A6NKT7 MT-TP-201ENST00000387461 68 ntBASIC1.69□□□□□ -2.14
RGPD3A6NKT7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.69□□□□□ -2.14
RGPD3A6NKT7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.69□□□□□ -2.14
RGPD3A6NKT7 RPL35AP22-201ENST00000436855 335 ntBASIC1.69□□□□□ -2.14
RGPD3A6NKT7 SNRPGP13-201ENST00000442212 177 ntBASIC1.69□□□□□ -2.14
RGPD3A6NKT7 AC087879.1-201ENST00000474343 374 ntBASIC1.69□□□□□ -2.14
RGPD3A6NKT7 AC022493.1-201ENST00000492984 337 ntBASIC1.69□□□□□ -2.14
RGPD3A6NKT7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.69□□□□□ -2.14
RGPD3A6NKT7 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.69□□□□□ -2.14
RGPD3A6NKT7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RGPD3A6NKT7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RGPD3A6NKT7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.69□□□□□ -2.14
RGPD3A6NKT7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.69□□□□□ -2.14
RGPD3A6NKT7 AP003117.1-201ENST00000602771 554 ntBASIC1.69□□□□□ -2.14
RGPD3A6NKT7 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RGPD3A6NKT7 Y_RNA.295-201ENST00000364918 102 ntBASIC1.68□□□□□ -2.14
RGPD3A6NKT7 RPS23P3-201ENST00000470993 430 ntBASIC1.68□□□□□ -2.14
RGPD3A6NKT7 MTND3P24-201ENST00000506306 329 ntBASIC1.68□□□□□ -2.14
RGPD3A6NKT7 AC087808.1-201ENST00000520501 361 ntBASIC1.68□□□□□ -2.14
RGPD3A6NKT7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.68□□□□□ -2.14
RGPD3A6NKT7 CYCSP26-201ENST00000534107 320 ntBASIC1.68□□□□□ -2.14
RGPD3A6NKT7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RGPD3A6NKT7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
RGPD3A6NKT7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
RGPD3A6NKT7 AL445183.3-201ENST00000414168 502 ntBASIC1.67□□□□□ -2.14
RGPD3A6NKT7 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.67□□□□□ -2.14
RGPD3A6NKT7 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.67□□□□□ -2.14
RGPD3A6NKT7 OR10R1P-201ENST00000441524 1141 ntBASIC1.67□□□□□ -2.14
RGPD3A6NKT7 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.67□□□□□ -2.14
RGPD3A6NKT7 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.67□□□□□ -2.14
RGPD3A6NKT7 AC084364.2-201ENST00000546924 395 ntBASIC1.67□□□□□ -2.14
RGPD3A6NKT7 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC1.67□□□□□ -2.14
RGPD3A6NKT7 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RGPD3A6NKT7 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.67□□□□□ -2.14
RGPD3A6NKT7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.67□□□□□ -2.14
RGPD3A6NKT7 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RGPD3A6NKT7 SNORD114-27-201ENST00000363766 70 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms