Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 CYCSP30-201ENST00000546447 172 ntBASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 USP8P1-201ENST00000494673 3183 ntBASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 RNA5SP52-201ENST00000362448 134 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 RNU5A-1-201ENST00000362698 116 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 RNU6-1287P-201ENST00000362914 107 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 Y_RNA.100-201ENST00000363141 102 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 RNU6-1060P-201ENST00000384664 107 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 SNORD37.1-201ENST00000390968 65 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 UBE2V1P2-201ENST00000397758 440 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 AL592114.1-201ENST00000403842 483 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 RN7SKP140-201ENST00000411196 284 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 AL035423.1-201ENST00000420331 213 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 ELOCP23-201ENST00000452014 332 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 AC087588.1-201ENST00000462203 316 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 RN7SL601P-201ENST00000471221 293 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 AC106707.2-201ENST00000484182 374 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 RNU6-677P-201ENST00000516914 101 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 RAB11AP2-201ENST00000545905 639 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 BPIFA4P-203ENST00000603168 689 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 AL390240.1-201ENST00000612950 384 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 AL359314.1-201ENST00000616913 261 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 uc_338.34-201ENST00000617467 174 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 AL136221.1-201ENST00000621449 509 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 AC090617.10-201ENST00000624308 134 ntBASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC85CA6NKD9 AC107068.1-201ENST00000563286 4218 ntBASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 AC121333.1-201ENST00000567488 2709 ntBASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 SNORA31-201ENST00000362607 130 ntBASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 RNU6-190P-201ENST00000384154 102 ntBASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 MT-TD-201ENST00000387419 68 ntBASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 AL645937.1-202ENST00000421799 937 ntBASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 KCTD9P3-201ENST00000434597 1169 ntBASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 TXNP1-201ENST00000441872 371 ntBASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 RNU6-953P-201ENST00000459154 107 ntBASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 SCARNA15.2-201ENST00000516409 127 ntBASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 AL359219.2-201ENST00000555184 348 ntBASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 PSMA3P-201ENST00000555485 635 ntBASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 AC022968.1-201ENST00000567372 442 ntBASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 AC069234.5-201ENST00000611056 416 ntBASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 AL021997.2-201ENST00000615674 271 ntBASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 AL359547.2-201ENST00000615810 418 ntBASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 MTND4P14-201ENST00000435799 1354 ntBASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC85CA6NKD9 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 RNU6-82P-201ENST00000363970 107 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 MIR514A1-201ENST00000385133 98 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 ARL4AP5-201ENST00000404372 599 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 MIR1290-201ENST00000408735 78 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms