Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
BIVM-ERCC5R4GMW8 TRAPPC2P9-201ENST00000434556 343 ntBASIC1.86□□□□□ -2.11
BIVM-ERCC5R4GMW8 RFC5P1-201ENST00000454419 874 ntBASIC1.86□□□□□ -2.11
BIVM-ERCC5R4GMW8 SNORA31.23-201ENST00000517219 133 ntBASIC1.86□□□□□ -2.11
BIVM-ERCC5R4GMW8 MTCO1P47-201ENST00000523889 1271 ntBASIC1.86□□□□□ -2.11
BIVM-ERCC5R4GMW8 DUXAP5-201ENST00000529668 529 ntBASIC1.86□□□□□ -2.11
BIVM-ERCC5R4GMW8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.86□□□□□ -2.11
BIVM-ERCC5R4GMW8 AL136520.1-201ENST00000600311 1322 ntBASIC1.86□□□□□ -2.11
BIVM-ERCC5R4GMW8 SNORA62.1-201ENST00000364287 154 ntBASIC1.85□□□□□ -2.11
BIVM-ERCC5R4GMW8 RPL31P2-201ENST00000413849 377 ntBASIC1.85□□□□□ -2.11
BIVM-ERCC5R4GMW8 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.85□□□□□ -2.11
BIVM-ERCC5R4GMW8 AC005534.2-201ENST00000431047 433 ntBASIC1.85□□□□□ -2.11
BIVM-ERCC5R4GMW8 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.85□□□□□ -2.11
BIVM-ERCC5R4GMW8 AL121821.2-201ENST00000556081 394 ntBASIC1.85□□□□□ -2.11
BIVM-ERCC5R4GMW8 ZNF734P-201ENST00000419494 1534 ntBASIC1.85□□□□□ -2.11
BIVM-ERCC5R4GMW8 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
BIVM-ERCC5R4GMW8 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.84□□□□□ -2.11
BIVM-ERCC5R4GMW8 RNU6-1263P-201ENST00000384601 106 ntBASIC1.84□□□□□ -2.11
BIVM-ERCC5R4GMW8 RNU6-882P-201ENST00000391025 103 ntBASIC1.84□□□□□ -2.11
BIVM-ERCC5R4GMW8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
BIVM-ERCC5R4GMW8 HMGN1P14-201ENST00000412459 517 ntBASIC1.84□□□□□ -2.11
BIVM-ERCC5R4GMW8 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.84□□□□□ -2.11
BIVM-ERCC5R4GMW8 AL022400.1-201ENST00000423946 935 ntBASIC1.84□□□□□ -2.11
BIVM-ERCC5R4GMW8 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.84□□□□□ -2.11
BIVM-ERCC5R4GMW8 AL078601.1-201ENST00000444542 271 ntBASIC1.84□□□□□ -2.11
BIVM-ERCC5R4GMW8 MTCO1P48-201ENST00000448024 1096 ntBASIC1.84□□□□□ -2.11
BIVM-ERCC5R4GMW8 SSXP4-201ENST00000451349 245 ntBASIC1.84□□□□□ -2.11
BIVM-ERCC5R4GMW8 MIR514B-201ENST00000516774 80 ntBASIC1.84□□□□□ -2.11
BIVM-ERCC5R4GMW8 SNORD59.2-201ENST00000516873 68 ntBASIC1.84□□□□□ -2.11
BIVM-ERCC5R4GMW8 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.84□□□□□ -2.11
BIVM-ERCC5R4GMW8 UBE2L4-201ENST00000587688 464 ntBASIC1.84□□□□□ -2.11
BIVM-ERCC5R4GMW8 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.84□□□□□ -2.11
BIVM-ERCC5R4GMW8 Y_RNA.251-201ENST00000364551 99 ntBASIC1.84□□□□□ -2.12
BIVM-ERCC5R4GMW8 MIR1285-1-201ENST00000408593 84 ntBASIC1.84□□□□□ -2.12
BIVM-ERCC5R4GMW8 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.84□□□□□ -2.12
BIVM-ERCC5R4GMW8 AC234781.2-201ENST00000426370 994 ntBASIC1.84□□□□□ -2.12
BIVM-ERCC5R4GMW8 AL591704.1-201ENST00000432574 275 ntBASIC1.84□□□□□ -2.12
BIVM-ERCC5R4GMW8 AC005297.2-201ENST00000450430 606 ntBASIC1.84□□□□□ -2.12
BIVM-ERCC5R4GMW8 RPS27P21-201ENST00000486977 252 ntBASIC1.84□□□□□ -2.12
BIVM-ERCC5R4GMW8 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
BIVM-ERCC5R4GMW8 GLYCAM1-201ENST00000546596 285 ntBASIC1.84□□□□□ -2.12
BIVM-ERCC5R4GMW8 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC1.84□□□□□ -2.12
BIVM-ERCC5R4GMW8 AC245036.5-201ENST00000596330 847 ntBASIC1.84□□□□□ -2.12
BIVM-ERCC5R4GMW8 AP000676.4-201ENST00000624659 623 ntBASIC1.84□□□□□ -2.12
BIVM-ERCC5R4GMW8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
BIVM-ERCC5R4GMW8 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
BIVM-ERCC5R4GMW8 RNU1-139P-201ENST00000391307 165 ntBASIC1.83□□□□□ -2.12
BIVM-ERCC5R4GMW8 RPL7P27-201ENST00000403775 720 ntBASIC1.83□□□□□ -2.12
BIVM-ERCC5R4GMW8 AC092447.6-201ENST00000414578 210 ntBASIC1.83□□□□□ -2.12
BIVM-ERCC5R4GMW8 SNRPEP10-201ENST00000420249 274 ntBASIC1.83□□□□□ -2.12
BIVM-ERCC5R4GMW8 HMGB3P10-201ENST00000434734 572 ntBASIC1.83□□□□□ -2.12
BIVM-ERCC5R4GMW8 MTCYBP12-201ENST00000440559 1134 ntBASIC1.83□□□□□ -2.12
BIVM-ERCC5R4GMW8 AC012640.5-201ENST00000623897 319 ntBASIC1.83□□□□□ -2.12
BIVM-ERCC5R4GMW8 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.83□□□□□ -2.12
BIVM-ERCC5R4GMW8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
BIVM-ERCC5R4GMW8 RNU4-38P-201ENST00000364472 129 ntBASIC1.82□□□□□ -2.12
BIVM-ERCC5R4GMW8 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.82□□□□□ -2.12
BIVM-ERCC5R4GMW8 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.82□□□□□ -2.12
BIVM-ERCC5R4GMW8 AL121601.2-201ENST00000438019 707 ntBASIC1.82□□□□□ -2.12
BIVM-ERCC5R4GMW8 RPL17P49-201ENST00000443728 411 ntBASIC1.82□□□□□ -2.12
BIVM-ERCC5R4GMW8 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.82□□□□□ -2.12
BIVM-ERCC5R4GMW8 AL583843.1-201ENST00000456070 346 ntBASIC1.82□□□□□ -2.12
BIVM-ERCC5R4GMW8 AC010200.2-201ENST00000605098 235 ntBASIC1.82□□□□□ -2.12
BIVM-ERCC5R4GMW8 AL135786.2-201ENST00000608422 615 ntBASIC1.82□□□□□ -2.12
BIVM-ERCC5R4GMW8 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
BIVM-ERCC5R4GMW8 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.81□□□□□ -2.12
BIVM-ERCC5R4GMW8 ATG12P2-201ENST00000456830 416 ntBASIC1.81□□□□□ -2.12
BIVM-ERCC5R4GMW8 RNU2-44P-201ENST00000516795 194 ntBASIC1.81□□□□□ -2.12
BIVM-ERCC5R4GMW8 AF279873.1-201ENST00000523393 313 ntBASIC1.81□□□□□ -2.12
BIVM-ERCC5R4GMW8 VN1R107P-201ENST00000601784 209 ntBASIC1.81□□□□□ -2.12
BIVM-ERCC5R4GMW8 AC106028.5-201ENST00000610332 395 ntBASIC1.81□□□□□ -2.12
BIVM-ERCC5R4GMW8 AL445493.3-201ENST00000619568 477 ntBASIC1.81□□□□□ -2.12
BIVM-ERCC5R4GMW8 AC097655.1-201ENST00000635075 318 ntBASIC1.81□□□□□ -2.12
BIVM-ERCC5R4GMW8 AC068620.4-201ENST00000636730 1182 ntBASIC1.81□□□□□ -2.12
BIVM-ERCC5R4GMW8 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.81□□□□□ -2.12
BIVM-ERCC5R4GMW8 AC108059.3-201ENST00000456388 214 ntBASIC1.8□□□□□ -2.12
BIVM-ERCC5R4GMW8 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.8□□□□□ -2.12
BIVM-ERCC5R4GMW8 AC087854.1-201ENST00000519706 414 ntBASIC1.8□□□□□ -2.12
BIVM-ERCC5R4GMW8 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.8□□□□□ -2.12
BIVM-ERCC5R4GMW8 AL031601.2-202ENST00000622650 282 ntBASIC1.8□□□□□ -2.12
BIVM-ERCC5R4GMW8 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.8□□□□□ -2.12
BIVM-ERCC5R4GMW8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
BIVM-ERCC5R4GMW8 RNU1-133P-201ENST00000364867 167 ntBASIC1.8□□□□□ -2.12
BIVM-ERCC5R4GMW8 SNORA18.2-201ENST00000383865 132 ntBASIC1.8□□□□□ -2.12
BIVM-ERCC5R4GMW8 TXNP7-201ENST00000406296 293 ntBASIC1.8□□□□□ -2.12
BIVM-ERCC5R4GMW8 SNRPFP3-201ENST00000457792 225 ntBASIC1.8□□□□□ -2.12
BIVM-ERCC5R4GMW8 RNU6-711P-201ENST00000517255 106 ntBASIC1.8□□□□□ -2.12
BIVM-ERCC5R4GMW8 IGHVIII-38-1-201ENST00000521454 282 ntBASIC1.8□□□□□ -2.12
BIVM-ERCC5R4GMW8 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.8□□□□□ -2.12
BIVM-ERCC5R4GMW8 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.8□□□□□ -2.12
BIVM-ERCC5R4GMW8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
BIVM-ERCC5R4GMW8 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.79□□□□□ -2.12
BIVM-ERCC5R4GMW8 DDX43P2-201ENST00000604753 1354 ntBASIC1.79□□□□□ -2.12
BIVM-ERCC5R4GMW8 Y_RNA.68-201ENST00000362881 102 ntBASIC1.79□□□□□ -2.12
BIVM-ERCC5R4GMW8 SNORA51.12-201ENST00000384448 134 ntBASIC1.79□□□□□ -2.12
BIVM-ERCC5R4GMW8 MIR513A1-201ENST00000385138 129 ntBASIC1.79□□□□□ -2.12
BIVM-ERCC5R4GMW8 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
BIVM-ERCC5R4GMW8 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.79□□□□□ -2.12
BIVM-ERCC5R4GMW8 RPS29P23-201ENST00000458635 123 ntBASIC1.79□□□□□ -2.12
BIVM-ERCC5R4GMW8 AC009901.1-201ENST00000506703 541 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 310.6 ms