Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 AC017071.1-201ENST00000564407 2204 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 MTND4P16-201ENST00000466108 1367 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 RNU6-432P-201ENST00000384196 109 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 SNORA7.4-201ENST00000384249 137 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 RNA5SP252-201ENST00000391131 119 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AL139281.1-201ENST00000422120 335 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 BX890604.2-201ENST00000427883 474 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 FAM103A2P-201ENST00000444122 354 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AC008264.1-201ENST00000447612 367 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 SNRPGP6-201ENST00000451124 220 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AC098826.2-201ENST00000452011 651 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AC006539.3-201ENST00000454258 129 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 OR6K1P-201ENST00000456766 971 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 RPS3AP22-201ENST00000488297 769 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 OR2A20P-203ENST00000498397 1268 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 CDC42P4-201ENST00000510507 563 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AP000867.2-201ENST00000532468 320 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AC013828.2-201ENST00000532487 235 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 TRAV37-201ENST00000553906 342 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AC008015.1-201ENST00000555505 465 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AP001004.1-201ENST00000582468 324 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AC090616.2-202ENST00000584248 222 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 UBE2L4-201ENST00000587688 464 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 RPL23AP78-201ENST00000599928 470 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AC112187.2-201ENST00000604345 283 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AC107214.2-201ENST00000608204 634 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AC103710.4-201ENST00000609301 899 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AL158801.5-201ENST00000623123 465 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AL137790.1-201ENST00000634283 177 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AL049641.1-201ENST00000441055 1948 ntBASIC3.14□□□□□ -1.91
PCDHGA1Q9Y5H4 AC010680.1-201ENST00000590024 3590 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AC007785.2-201ENST00000598627 1916 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AL138713.1-201ENST00000624026 2130 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AC008669.1-201ENST00000565823 2178 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 RNU6-660P-201ENST00000364566 109 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 SNORA23-201ENST00000365128 182 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 RNU6-741P-201ENST00000383889 107 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 RNU6-1035P-201ENST00000384477 107 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AL049545.1-201ENST00000401856 572 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AL136116.1-201ENST00000403591 381 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AL031121.1-201ENST00000406553 254 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AL390023.1-201ENST00000428836 262 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 RPL23AP69-201ENST00000431134 458 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 UBE2D3P1-201ENST00000436669 444 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 RPL23AP58-201ENST00000440453 469 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AC025750.2-201ENST00000442609 450 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AC010099.1-201ENST00000455434 375 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 RPS29P12-201ENST00000460178 152 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 MTCO2P6-201ENST00000463134 685 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AL049874.1-201ENST00000489560 388 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AC118465.1-201ENST00000513820 1271 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AC026407.1-201ENST00000518369 204 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AC007954.1-201ENST00000554198 494 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AMZ2P1-203ENST00000565833 850 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AC145350.1-201ENST00000567426 208 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AL033523.1-201ENST00000605153 153 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AC107294.3-201ENST00000609211 526 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AC004223.4-201ENST00000612426 332 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 SNORD39.4-201ENST00000620099 78 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AP003485.2-201ENST00000623636 610 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AC120349.3-201ENST00000624377 529 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 MIR622-201ENST00000638396 96 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 OR5H6-203ENST00000642105 978 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 MTND5P33-201ENST00000571250 1450 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms