Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 MAPK10-303ENST00000641324 3959 ntBASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 OR1S2-201ENST00000302592 978 ntBASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 SNORD115.1-201ENST00000391109 76 ntBASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 RN7SKP247-201ENST00000411094 308 ntBASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 AL049734.2-201ENST00000441066 616 ntBASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 PCNPP5-201ENST00000452246 481 ntBASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 PPP1R2P5-201ENST00000457256 603 ntBASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 AC026464.5-201ENST00000562497 722 ntBASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 CKS1BP3-201ENST00000600888 237 ntBASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 CYP2C61P-201ENST00000604072 290 ntBASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 AC021646.1-201ENST00000605469 484 ntBASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 DISC2.1-201ENST00000612827 205 ntBASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 AL359757.2-201ENST00000624309 274 ntBASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 AC132825.6-201ENST00000638861 357 ntBASIC5.77□□□□□ -1.49
COL17A1Q9UMD9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 AC097504.1-201ENST00000515103 2415 ntBASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 RNU6-746P-201ENST00000384112 109 ntBASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 MRPL42P3-201ENST00000401492 326 ntBASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 DPH3P2-201ENST00000422618 250 ntBASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 RPS26P40-201ENST00000435209 294 ntBASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 AC092013.1-201ENST00000438795 332 ntBASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 RPL21P10-201ENST00000463521 490 ntBASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 AC097462.2-201ENST00000504623 481 ntBASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 SNORA70.18-201ENST00000516696 98 ntBASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 RNU6-835P-201ENST00000516974 104 ntBASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 SNORA25.17-201ENST00000517184 124 ntBASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 AC009902.1-201ENST00000519351 183 ntBASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 AC083806.3-201ENST00000614016 455 ntBASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 AL450472.3-201ENST00000615578 367 ntBASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 AL133216.2-202ENST00000634512 349 ntBASIC5.76□□□□□ -1.49
COL17A1Q9UMD9 AC008079.2-201ENST00000623543 20396 ntBASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 SRP72P2-201ENST00000344851 1979 ntBASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 AC020633.1-201ENST00000468439 2247 ntBASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 RNU1-15P-201ENST00000353977 144 ntBASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 Y_RNA.187-201ENST00000363918 113 ntBASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 MRPL42P2-201ENST00000403169 426 ntBASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 RNU4-14P-201ENST00000410858 122 ntBASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 AL356968.1-201ENST00000416622 474 ntBASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 MTND5P15-201ENST00000434246 349 ntBASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 MTCO1P42-201ENST00000457379 726 ntBASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 AC025554.1-201ENST00000505641 188 ntBASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 AC110794.1-201ENST00000505816 425 ntBASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 AC067942.3-201ENST00000512025 362 ntBASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 Y_RNA.672-201ENST00000516289 104 ntBASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 AC100812.1-201ENST00000607622 580 ntBASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL17A1Q9UMD9 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
COL17A1Q9UMD9 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
COL17A1Q9UMD9 Z95327.2-201ENST00000414579 1873 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms