Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC016717.2-201ENST00000609089 5141 ntBASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 RNA5SP393-201ENST00000363423 117 ntBASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 RNU5B-4P-201ENST00000363508 111 ntBASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 RNU6-1300P-201ENST00000391046 108 ntBASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 SNORA3.2-201ENST00000408221 125 ntBASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 U3.37-201ENST00000408528 213 ntBASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 SUMO1P4-201ENST00000429430 302 ntBASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 HMGB3P12-201ENST00000438745 556 ntBASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 COX6CP18-201ENST00000448769 222 ntBASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 MRPL42P4-201ENST00000453267 443 ntBASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 AC107222.1-201ENST00000510899 637 ntBASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 AP001189.2-201ENST00000527320 189 ntBASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 AC092451.2-201ENST00000538746 658 ntBASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 AC090132.2-201ENST00000615881 347 ntBASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 AC004009.2-201ENST00000623016 728 ntBASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CTNNA3Q9UI47 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 FAM133CP-201ENST00000332869 704 ntBASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 RNU6-461P-201ENST00000364195 107 ntBASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 SNORA36C-201ENST00000384289 132 ntBASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 RNU6-1257P-201ENST00000384625 110 ntBASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 SNORA80E-201ENST00000384744 137 ntBASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 RNA5SP425-201ENST00000410336 112 ntBASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 AC099548.1-201ENST00000421443 426 ntBASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 AL445687.1-201ENST00000439946 251 ntBASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 RPS20P22-201ENST00000473700 357 ntBASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 RPL36AP51-201ENST00000487216 318 ntBASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 AL049874.1-201ENST00000489560 388 ntBASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 RNU6-1282P-201ENST00000516735 96 ntBASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 snoZ278.1-201ENST00000517059 112 ntBASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 MIR3117-201ENST00000584034 78 ntBASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 KC877982.1-201ENST00000602313 470 ntBASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 AC098826.3-201ENST00000603823 466 ntBASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 AC013553.2-201ENST00000604244 589 ntBASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 AC011890.2-201ENST00000613393 294 ntBASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 MIR1291-201ENST00000627649 87 ntBASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CTNNA3Q9UI47 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 TAS2R15P-201ENST00000390674 928 ntBASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 U3.20-201ENST00000390909 217 ntBASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 RPS7P9-201ENST00000414704 586 ntBASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 Z85995.1-201ENST00000415547 335 ntBASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 NDUFB4P7-201ENST00000423198 363 ntBASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 AC013262.1-201ENST00000426710 252 ntBASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 FGF7P5-201ENST00000441829 291 ntBASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 OFD1P3Y-201ENST00000453312 783 ntBASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 MTND2P24-201ENST00000453434 806 ntBASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 IGKV3-31-201ENST00000523109 329 ntBASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 AP003066.2-201ENST00000529375 555 ntBASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 MIR4446-201ENST00000578505 67 ntBASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 AC067747.1-201ENST00000608026 250 ntBASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 AP003399.1-201ENST00000637534 361 ntBASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.88□□□□□ -1.95
CTNNA3Q9UI47 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.87□□□□□ -1.95
CTNNA3Q9UI47 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.87□□□□□ -1.95
CTNNA3Q9UI47 RNU6-76P-201ENST00000384060 104 ntBASIC2.87□□□□□ -1.95
CTNNA3Q9UI47 SNRPEP2-201ENST00000397592 279 ntBASIC2.87□□□□□ -1.95
CTNNA3Q9UI47 RPS4XP7-201ENST00000406274 780 ntBASIC2.87□□□□□ -1.95
CTNNA3Q9UI47 LUZP4P1-201ENST00000415420 344 ntBASIC2.87□□□□□ -1.95
CTNNA3Q9UI47 MTATP6P27-201ENST00000416987 621 ntBASIC2.87□□□□□ -1.95
CTNNA3Q9UI47 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.87□□□□□ -1.95
CTNNA3Q9UI47 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.87□□□□□ -1.95
CTNNA3Q9UI47 DDX3P2-201ENST00000446138 111 ntBASIC2.87□□□□□ -1.95
CTNNA3Q9UI47 DPPA3P1-201ENST00000448050 469 ntBASIC2.87□□□□□ -1.95
CTNNA3Q9UI47 AC005297.2-201ENST00000450430 606 ntBASIC2.87□□□□□ -1.95
CTNNA3Q9UI47 AL353691.1-201ENST00000451332 387 ntBASIC2.87□□□□□ -1.95
CTNNA3Q9UI47 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.87□□□□□ -1.95
CTNNA3Q9UI47 snoU13.23-201ENST00000458863 104 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms