Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 AC244098.2-201ENST00000422068 99 ntBASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 BX276092.3-201ENST00000424182 230 ntBASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 AC073587.1-201ENST00000447093 876 ntBASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 AL031274.1-201ENST00000450334 232 ntBASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 AL353752.1-201ENST00000454946 260 ntBASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 RPS23P3-201ENST00000470993 430 ntBASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 AC016727.2-201ENST00000603988 621 ntBASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 SNORD58B-201ENST00000607313 66 ntBASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CXXC1Q9P0U4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 RNA5SP509-201ENST00000364577 119 ntBASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 SNORA70.4-201ENST00000365509 134 ntBASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 RHOT1P2-201ENST00000366423 333 ntBASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 Y_RNA.485-201ENST00000384395 102 ntBASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 RNA5SP397-201ENST00000391323 118 ntBASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 AL357515.1-201ENST00000402967 542 ntBASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 SNORA11.1-201ENST00000408133 129 ntBASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 RNU6-325P-201ENST00000411132 105 ntBASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 AL158071.1-201ENST00000430315 461 ntBASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 AC009238.2-201ENST00000431026 355 ntBASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 CECR9-201ENST00000453421 199 ntBASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 AC022493.1-201ENST00000492984 337 ntBASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 AC105758.1-201ENST00000506038 399 ntBASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 MIR2116-201ENST00000517221 80 ntBASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 AP000889.1-201ENST00000530968 660 ntBASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 AC022726.1-201ENST00000587475 207 ntBASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 AC023043.4-201ENST00000612081 449 ntBASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 ZYXP1-201ENST00000617638 118 ntBASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 AL731566.1-201ENST00000620490 1937 ntBASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.28□□□□□ -1.56
CXXC1Q9P0U4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 RNU6-26P-201ENST00000383985 107 ntBASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 RNU6-1109P-201ENST00000391187 107 ntBASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 RPL7P2-201ENST00000427639 268 ntBASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 AL353997.1-201ENST00000432936 108 ntBASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 AC010655.3-201ENST00000478818 450 ntBASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 AC114801.2-201ENST00000503825 781 ntBASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 AC113155.1-201ENST00000511141 769 ntBASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 ATP5F1P5-201ENST00000526403 760 ntBASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 TRAV37-201ENST00000553906 342 ntBASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 MIR3921-201ENST00000577308 85 ntBASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 PRPF19P1-201ENST00000584766 898 ntBASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 Z98751.3-201ENST00000604447 521 ntBASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 AL161798.1-201ENST00000604630 131 ntBASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 MIR6839-201ENST00000620425 113 ntBASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 AC019206.1-201ENST00000621938 425 ntBASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CXXC1Q9P0U4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXXC1Q9P0U4 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXXC1Q9P0U4 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXXC1Q9P0U4 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CXXC1Q9P0U4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.26□□□□□ -1.57
CXXC1Q9P0U4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXXC1Q9P0U4 AC093671.1-201ENST00000624981 2929 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms