Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 YPEL5P1-201ENST00000419731 367 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 MTND1P29-201ENST00000448112 647 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 SSXP4-201ENST00000451349 245 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 SSXP1-201ENST00000453640 473 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 NDUFB4P2-201ENST00000509515 391 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 SNORA31.8-201ENST00000516327 108 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 RNU6-201P-201ENST00000517100 61 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AP000873.5-201ENST00000533906 236 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AC005951.2-201ENST00000576282 495 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 MIR4474-201ENST00000579189 78 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AC015871.2-201ENST00000603605 948 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AC121334.2-201ENST00000605387 271 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AC004908.2-201ENST00000609090 574 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 uc_338.1-201ENST00000612113 180 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AC091953.2-201ENST00000623979 160 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AL138713.1-201ENST00000624026 2130 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AC073346.2-201ENST00000624724 2058 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 RNU5A-8P-201ENST00000364102 114 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 SNORA23-201ENST00000365128 182 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 RNU6-805P-201ENST00000365643 106 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AC007283.2-201ENST00000424739 197 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AC019097.1-201ENST00000424783 735 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 VN1R108P-201ENST00000431580 830 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 TIMM9P1-201ENST00000436122 256 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AL353706.1-201ENST00000436728 494 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AL592447.1-201ENST00000447592 540 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AL162389.1-201ENST00000449233 177 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AC021205.2-201ENST00000480069 347 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 RPL23AP41-201ENST00000484754 458 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 RNU6-840P-201ENST00000517275 65 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 ERHP1-201ENST00000523006 310 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AC137800.2-201ENST00000574375 120 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 MIR3146-201ENST00000580367 79 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 MIR3118-1-201ENST00000581787 76 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 BDH2P1-201ENST00000602288 736 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AL359999.1-201ENST00000604513 294 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AC087752.4-201ENST00000605911 462 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AC131902.3-201ENST00000611767 581 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AC090970.3-201ENST00000612566 866 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AL390240.1-201ENST00000612950 384 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 TUG1_2.1-201ENST00000614234 87 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AC006338.1-201ENST00000618453 749 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AC110994.2-201ENST00000635481 492 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AC092104.1-201ENST00000497346 1441 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 AC005832.2-201ENST00000538921 1430 ntBASIC3.16□□□□□ -1.9
SPHK1Q9NYA1 DDX10P1-201ENST00000448545 1933 ntBASIC3.15□□□□□ -1.9
SPHK1Q9NYA1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SPHK1Q9NYA1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SPHK1Q9NYA1 RPL7P26-201ENST00000333817 754 ntBASIC3.15□□□□□ -1.91
SPHK1Q9NYA1 RNU5A-1-201ENST00000362698 116 ntBASIC3.15□□□□□ -1.91
SPHK1Q9NYA1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SPHK1Q9NYA1 SNORD115.1-201ENST00000391109 76 ntBASIC3.15□□□□□ -1.91
SPHK1Q9NYA1 RNA5SP229-201ENST00000410809 99 ntBASIC3.15□□□□□ -1.91
SPHK1Q9NYA1 RPS3AP3-201ENST00000411933 242 ntBASIC3.15□□□□□ -1.91
SPHK1Q9NYA1 MTND1P21-201ENST00000412991 285 ntBASIC3.15□□□□□ -1.91
SPHK1Q9NYA1 RPL21P32-201ENST00000419877 477 ntBASIC3.15□□□□□ -1.91
SPHK1Q9NYA1 AC006366.1-201ENST00000422002 759 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms