Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.17□□□□□ -1.74
CCM2LQ9NUG4 AC007424.1-203ENST00000554613 687 ntBASIC4.17□□□□□ -1.74
CCM2LQ9NUG4 AL121576.1-201ENST00000556055 276 ntBASIC4.17□□□□□ -1.74
CCM2LQ9NUG4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.17□□□□□ -1.74
CCM2LQ9NUG4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.17□□□□□ -1.74
CCM2LQ9NUG4 FGF7P1-201ENST00000582820 288 ntBASIC4.17□□□□□ -1.74
CCM2LQ9NUG4 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.17□□□□□ -1.74
CCM2LQ9NUG4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.17□□□□□ -1.74
CCM2LQ9NUG4 AC012603.1-201ENST00000606424 528 ntBASIC4.17□□□□□ -1.74
CCM2LQ9NUG4 AC093913.1-201ENST00000614178 329 ntBASIC4.17□□□□□ -1.74
CCM2LQ9NUG4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.17□□□□□ -1.74
CCM2LQ9NUG4 C2orf27A-204ENST00000623058 969 ntBASIC4.17□□□□□ -1.74
CCM2LQ9NUG4 AC090617.10-201ENST00000624308 134 ntBASIC4.17□□□□□ -1.74
CCM2LQ9NUG4 AC008785.1-201ENST00000624475 456 ntBASIC4.17□□□□□ -1.74
CCM2LQ9NUG4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCM2LQ9NUG4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCM2LQ9NUG4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.17□□□□□ -1.74
CCM2LQ9NUG4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCM2LQ9NUG4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.17□□□□□ -1.74
CCM2LQ9NUG4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 Y_RNA.100-201ENST00000363141 102 ntBASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 RN7SKP44-201ENST00000363602 316 ntBASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 RNU1-64P-201ENST00000365443 163 ntBASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 AL359837.1-201ENST00000381357 287 ntBASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 RNU6-14P-201ENST00000384630 106 ntBASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 MIR1911-201ENST00000410783 80 ntBASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 RNA5SP306-201ENST00000411087 107 ntBASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 RPL7P12-201ENST00000446719 750 ntBASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 AC104058.1-201ENST00000448028 297 ntBASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 MTND1P11-201ENST00000456661 876 ntBASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 PSMA2P1-201ENST00000526365 646 ntBASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 VN1R85P-201ENST00000601587 426 ntBASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 AL670379.4-201ENST00000605279 254 ntBASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 AL136221.1-201ENST00000621449 509 ntBASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 AC011944.2-201ENST00000624440 683 ntBASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 U3.53-201ENST00000628922 216 ntBASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 AC018555.1-201ENST00000567548 1980 ntBASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCM2LQ9NUG4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCM2LQ9NUG4 RNU6-116P-201ENST00000384042 109 ntBASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 MIR134-201ENST00000385258 73 ntBASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 SDHCP2-201ENST00000398565 501 ntBASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 RNA5SP111-201ENST00000411386 101 ntBASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 RPEP3-201ENST00000425462 676 ntBASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 AL590383.1-201ENST00000428602 75 ntBASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 MTND4LP16-201ENST00000440828 295 ntBASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 AC007547.1-201ENST00000462177 490 ntBASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 AC011276.1-201ENST00000469688 323 ntBASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 RPL7P19-201ENST00000469948 618 ntBASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 AC108475.1-201ENST00000507880 950 ntBASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 Y_RNA.689-201ENST00000516589 107 ntBASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 AC023050.3-201ENST00000541142 333 ntBASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 AC005261.5-201ENST00000596280 355 ntBASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 AC034102.8-201ENST00000615146 484 ntBASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CCM2LQ9NUG4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 RNU6-845P-201ENST00000362578 103 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 RNU6-288P-201ENST00000363690 104 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 Y_RNA.166-201ENST00000363730 102 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 MT-TD-201ENST00000387419 68 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms