Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 RNU6ATAC-201ENST00000408749 126 ntBASIC5.43□□□□□ -1.54
ATG3Q9NT62 Y_RNA.646-201ENST00000410980 101 ntBASIC5.43□□□□□ -1.54
ATG3Q9NT62 AL138785.1-201ENST00000425821 331 ntBASIC5.43□□□□□ -1.54
ATG3Q9NT62 OR4K11P-201ENST00000431829 904 ntBASIC5.43□□□□□ -1.54
ATG3Q9NT62 AC105402.2-201ENST00000438503 358 ntBASIC5.43□□□□□ -1.54
ATG3Q9NT62 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.43□□□□□ -1.54
ATG3Q9NT62 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.43□□□□□ -1.54
ATG3Q9NT62 RPL7P43-201ENST00000478876 753 ntBASIC5.43□□□□□ -1.54
ATG3Q9NT62 AC092436.1-201ENST00000506450 503 ntBASIC5.43□□□□□ -1.54
ATG3Q9NT62 AC087854.1-201ENST00000519706 414 ntBASIC5.43□□□□□ -1.54
ATG3Q9NT62 AC006064.5-201ENST00000541782 248 ntBASIC5.43□□□□□ -1.54
ATG3Q9NT62 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
ATG3Q9NT62 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.43□□□□□ -1.54
ATG3Q9NT62 MTCO3P23-201ENST00000561363 289 ntBASIC5.43□□□□□ -1.54
ATG3Q9NT62 MIR4790-201ENST00000577799 79 ntBASIC5.43□□□□□ -1.54
ATG3Q9NT62 OR4K8P-201ENST00000578842 1048 ntBASIC5.43□□□□□ -1.54
ATG3Q9NT62 AC017100.2-201ENST00000584628 355 ntBASIC5.43□□□□□ -1.54
ATG3Q9NT62 AL606490.9-201ENST00000603331 271 ntBASIC5.43□□□□□ -1.54
ATG3Q9NT62 PRR13P7-201ENST00000605538 430 ntBASIC5.43□□□□□ -1.54
ATG3Q9NT62 AL121992.2-201ENST00000606262 256 ntBASIC5.43□□□□□ -1.54
ATG3Q9NT62 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.43□□□□□ -1.54
ATG3Q9NT62 AC107871.2-201ENST00000612894 502 ntBASIC5.43□□□□□ -1.54
ATG3Q9NT62 AC140113.4-201ENST00000622087 222 ntBASIC5.43□□□□□ -1.54
ATG3Q9NT62 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
ATG3Q9NT62 CR392039.5-201ENST00000623201 510 ntBASIC5.43□□□□□ -1.54
ATG3Q9NT62 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
ATG3Q9NT62 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ATG3Q9NT62 XPOTP1-201ENST00000443317 2398 ntBASIC5.43□□□□□ -1.54
ATG3Q9NT62 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
ATG3Q9NT62 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.43□□□□□ -1.54
ATG3Q9NT62 EOGT-210ENST00000615922 1931 ntBASIC5.42□□□□□ -1.54
ATG3Q9NT62 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ATG3Q9NT62 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
ATG3Q9NT62 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ATG3Q9NT62 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ATG3Q9NT62 Y_RNA.22-201ENST00000362492 102 ntBASIC5.42□□□□□ -1.54
ATG3Q9NT62 RNA5SP124-201ENST00000362739 110 ntBASIC5.42□□□□□ -1.54
ATG3Q9NT62 RNU6-552P-201ENST00000362869 119 ntBASIC5.42□□□□□ -1.54
ATG3Q9NT62 Y_RNA.364-201ENST00000365532 101 ntBASIC5.42□□□□□ -1.54
ATG3Q9NT62 Y_RNA.512-201ENST00000384518 102 ntBASIC5.42□□□□□ -1.54
ATG3Q9NT62 RNU2-64P-201ENST00000411315 191 ntBASIC5.42□□□□□ -1.54
ATG3Q9NT62 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.42□□□□□ -1.54
ATG3Q9NT62 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.42□□□□□ -1.54
ATG3Q9NT62 AC020550.1-201ENST00000447385 163 ntBASIC5.42□□□□□ -1.54
ATG3Q9NT62 RPS20P21-201ENST00000466859 343 ntBASIC5.42□□□□□ -1.54
ATG3Q9NT62 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.42□□□□□ -1.54
ATG3Q9NT62 CYCSP28-201ENST00000534284 321 ntBASIC5.42□□□□□ -1.54
ATG3Q9NT62 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ATG3Q9NT62 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.42□□□□□ -1.54
ATG3Q9NT62 AC022655.2-201ENST00000577280 318 ntBASIC5.42□□□□□ -1.54
ATG3Q9NT62 MIR5685-201ENST00000579080 79 ntBASIC5.42□□□□□ -1.54
ATG3Q9NT62 GLUD1P4-201ENST00000590914 418 ntBASIC5.42□□□□□ -1.54
ATG3Q9NT62 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.42□□□□□ -1.54
ATG3Q9NT62 PNPT1P2-201ENST00000456768 2050 ntBASIC5.42□□□□□ -1.54
ATG3Q9NT62 AC010300.1-201ENST00000600671 5134 ntBASIC5.42□□□□□ -1.54
ATG3Q9NT62 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ATG3Q9NT62 ZNF519P1-201ENST00000449011 1626 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ATG3Q9NT62 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
ATG3Q9NT62 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
ATG3Q9NT62 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ATG3Q9NT62 AL157777.2-201ENST00000258070 137 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 Y_RNA.378-201ENST00000365652 113 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
ATG3Q9NT62 RNU6-1040P-201ENST00000383974 107 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 RNU6-1293P-201ENST00000384077 107 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 RNY1P14-201ENST00000384426 108 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 SNORD66.1-201ENST00000391230 76 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
ATG3Q9NT62 ARF4P3-201ENST00000397387 509 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 AL031679.1-201ENST00000400616 525 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 AL139397.2-201ENST00000404529 772 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ATG3Q9NT62 MIR1911-201ENST00000410783 80 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 RNU4-6P-201ENST00000410804 122 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 AC005019.1-201ENST00000436455 431 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 AL133547.1-201ENST00000448546 220 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 IFNWP4-201ENST00000453148 294 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.41□□□□□ -1.54
ATG3Q9NT62 RPS29P15-201ENST00000458329 171 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 AC090453.1-201ENST00000495560 436 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 AC021146.3-201ENST00000511911 260 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 RNA5SP454-201ENST00000517231 127 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 AC022882.1-201ENST00000532142 501 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.41□□□□□ -1.54
ATG3Q9NT62 AC113195.1-201ENST00000579952 141 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 MIR3146-201ENST00000580367 79 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.41□□□□□ -1.54
ATG3Q9NT62 AC130324.3-201ENST00000614165 542 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.41□□□□□ -1.54
ATG3Q9NT62 RNU6-156P-201ENST00000621869 107 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 MIR6500-201ENST00000622700 86 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 AC138627.2-201ENST00000624202 601 ntBASIC5.41□□□□□ -1.54
ATG3Q9NT62 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
ATG3Q9NT62 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
ATG3Q9NT62 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
ATG3Q9NT62 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ATG3Q9NT62 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ATG3Q9NT62 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ATG3Q9NT62 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms