Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2□□□□□ -2.09
UBQLN4Q9NRR5 AC010486.1-201ENST00000511793 424 ntBASIC2□□□□□ -2.09
UBQLN4Q9NRR5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2□□□□□ -2.09
UBQLN4Q9NRR5 SCARNA16.3-201ENST00000516595 184 ntBASIC2□□□□□ -2.09
UBQLN4Q9NRR5 AP002748.2-201ENST00000528671 348 ntBASIC2□□□□□ -2.09
UBQLN4Q9NRR5 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2□□□□□ -2.09
UBQLN4Q9NRR5 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2□□□□□ -2.09
UBQLN4Q9NRR5 SNORD53-201ENST00000579969 78 ntBASIC2□□□□□ -2.09
UBQLN4Q9NRR5 LRRC37A5P-203ENST00000580181 585 ntBASIC2□□□□□ -2.09
UBQLN4Q9NRR5 MIR4435-1-201ENST00000582552 80 ntBASIC2□□□□□ -2.09
UBQLN4Q9NRR5 AC090330.1-201ENST00000588646 764 ntBASIC2□□□□□ -2.09
UBQLN4Q9NRR5 AL590808.1-201ENST00000618696 141 ntBASIC2□□□□□ -2.09
UBQLN4Q9NRR5 MIR6873-201ENST00000622788 63 ntBASIC2□□□□□ -2.09
UBQLN4Q9NRR5 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2□□□□□ -2.09
UBQLN4Q9NRR5 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
UBQLN4Q9NRR5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2□□□□□ -2.09
UBQLN4Q9NRR5 AC005832.2-201ENST00000538921 1430 ntBASIC2□□□□□ -2.09
UBQLN4Q9NRR5 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 HMGB1P5-201ENST00000255320 642 ntBASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 RNU6-76P-201ENST00000384060 104 ntBASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 RNA5SP508-201ENST00000411327 119 ntBASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 MTND2P5-201ENST00000432656 1006 ntBASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 AL353691.1-201ENST00000451332 387 ntBASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 AC109486.1-201ENST00000486833 374 ntBASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 FAM172BP-201ENST00000487497 1089 ntBASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 AC044913.1-201ENST00000557200 430 ntBASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 AL022067.1-201ENST00000602426 454 ntBASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 AL121917.1-203ENST00000605534 577 ntBASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 AC004067.1-201ENST00000608733 700 ntBASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 MIR6840-201ENST00000611937 71 ntBASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 AC020658.4-201ENST00000613987 684 ntBASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 AC004009.2-201ENST00000623016 728 ntBASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 AC010149.2-201ENST00000637608 315 ntBASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 CKAP2P1-201ENST00000555477 2049 ntBASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 AL049641.1-201ENST00000441055 1948 ntBASIC1.99□□□□□ -2.09
UBQLN4Q9NRR5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 ELF2P3-201ENST00000445099 1506 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 MIR514A1-201ENST00000385133 98 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 AL445529.1-201ENST00000398713 389 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 SNORA11.4-201ENST00000408823 129 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 CCDC58P2-201ENST00000417131 366 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 AC018630.2-202ENST00000422992 927 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 AC098614.2-201ENST00000426040 255 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 AL590233.1-201ENST00000430017 456 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 UBE2V1P13-201ENST00000436983 439 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 PGBD4P3-201ENST00000440731 581 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 SUMO2P2-201ENST00000456482 255 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 LARP1BP2-201ENST00000486594 519 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 AC008413.1-201ENST00000511864 177 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 RNU6-1282P-201ENST00000516735 96 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 AC023632.1-201ENST00000518463 375 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 AC026616.1-201ENST00000523157 525 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 AC124947.2-202ENST00000552735 133 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 AC103710.4-201ENST00000609301 899 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 AC097460.3-201ENST00000623099 442 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 HPVC1-201ENST00000629899 1198 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 AP003399.1-201ENST00000637534 361 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 AL163152.1-201ENST00000642001 374 ntBASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.98□□□□□ -2.09
UBQLN4Q9NRR5 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.97□□□□□ -2.09
UBQLN4Q9NRR5 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.97□□□□□ -2.09
UBQLN4Q9NRR5 AL596028.1-201ENST00000326971 197 ntBASIC1.97□□□□□ -2.09
UBQLN4Q9NRR5 SNORA68.1-201ENST00000364537 132 ntBASIC1.97□□□□□ -2.09
UBQLN4Q9NRR5 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
UBQLN4Q9NRR5 RNU6-1300P-201ENST00000391046 108 ntBASIC1.97□□□□□ -2.09
UBQLN4Q9NRR5 AL513475.1-201ENST00000406602 315 ntBASIC1.97□□□□□ -2.09
UBQLN4Q9NRR5 HMGB1P11-201ENST00000413899 637 ntBASIC1.97□□□□□ -2.09
UBQLN4Q9NRR5 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms