Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RPS3AP4-201ENST00000555161 764 ntBASIC3.46□□□□□ -1.86
BRF2Q9HAW0 MIR3609-201ENST00000582661 80 ntBASIC3.46□□□□□ -1.86
BRF2Q9HAW0 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.46□□□□□ -1.86
BRF2Q9HAW0 AC067959.1-201ENST00000604334 379 ntBASIC3.46□□□□□ -1.86
BRF2Q9HAW0 AL451064.1-201ENST00000607718 471 ntBASIC3.46□□□□□ -1.86
BRF2Q9HAW0 AC244100.1-202ENST00000621554 382 ntBASIC3.46□□□□□ -1.86
BRF2Q9HAW0 AP003355.3-201ENST00000623465 114 ntBASIC3.46□□□□□ -1.86
BRF2Q9HAW0 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.46□□□□□ -1.86
BRF2Q9HAW0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.46□□□□□ -1.86
BRF2Q9HAW0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
BRF2Q9HAW0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
BRF2Q9HAW0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
BRF2Q9HAW0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 RPS4XP5-202ENST00000449995 1334 ntBASIC3.45□□□□□ -1.86
BRF2Q9HAW0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 RNU6-511P-201ENST00000363496 107 ntBASIC3.45□□□□□ -1.86
BRF2Q9HAW0 RN7SKP263-201ENST00000411194 309 ntBASIC3.45□□□□□ -1.86
BRF2Q9HAW0 Z85995.1-201ENST00000415547 335 ntBASIC3.45□□□□□ -1.86
BRF2Q9HAW0 ZNF90P2-204ENST00000419323 1075 ntBASIC3.45□□□□□ -1.86
BRF2Q9HAW0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 RPS29P7-201ENST00000439662 171 ntBASIC3.45□□□□□ -1.86
BRF2Q9HAW0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 AL031667.1-201ENST00000440222 725 ntBASIC3.45□□□□□ -1.86
BRF2Q9HAW0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 AC006445.2-201ENST00000510061 472 ntBASIC3.45□□□□□ -1.86
BRF2Q9HAW0 TTC39CP1-201ENST00000512513 755 ntBASIC3.45□□□□□ -1.86
BRF2Q9HAW0 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 Y_RNA.655-201ENST00000515919 96 ntBASIC3.45□□□□□ -1.86
BRF2Q9HAW0 RN7SKP21-201ENST00000516503 220 ntBASIC3.45□□□□□ -1.86
BRF2Q9HAW0 AP006245.1-201ENST00000522549 120 ntBASIC3.45□□□□□ -1.86
BRF2Q9HAW0 CASP1P1-201ENST00000526345 212 ntBASIC3.45□□□□□ -1.86
BRF2Q9HAW0 ARL2BPP2-201ENST00000550907 489 ntBASIC3.45□□□□□ -1.86
BRF2Q9HAW0 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 HMGB1P6-201ENST00000569046 646 ntBASIC3.45□□□□□ -1.86
BRF2Q9HAW0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 MIR3160-1-201ENST00000577972 85 ntBASIC3.45□□□□□ -1.86
BRF2Q9HAW0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 U7.8-201ENST00000619968 63 ntBASIC3.45□□□□□ -1.86
BRF2Q9HAW0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.45□□□□□ -1.86
BRF2Q9HAW0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
BRF2Q9HAW0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
BRF2Q9HAW0 MFSD8-233ENST00000641482 4860 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 AC073073.2-201ENST00000609827 2578 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 AC068647.1-201ENST00000489539 2265 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 AC007656.2-201ENST00000624902 4547 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 RNU4-1-201ENST00000363925 141 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 RNU4-75P-201ENST00000364621 146 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.44□□□□□ -1.86
BRF2Q9HAW0 RPL21P17-201ENST00000397467 475 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 NDUFS5P1-201ENST00000405668 289 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 RNU2-36P-201ENST00000410361 191 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 RNA5SP38-201ENST00000410750 119 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 RPL30P2-201ENST00000414021 291 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.44□□□□□ -1.86
BRF2Q9HAW0 RPL7P2-201ENST00000427639 268 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 AL589823.1-201ENST00000429577 183 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 RPL23AP69-201ENST00000431134 458 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 HMGB1P27-201ENST00000431429 603 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 GAPDHP27-201ENST00000447427 1020 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.44□□□□□ -1.86
BRF2Q9HAW0 SNRPGP6-201ENST00000451124 220 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 AC087588.1-201ENST00000462203 316 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 RN7SL594P-201ENST00000470590 287 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 RPS3AP17-201ENST00000472594 777 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 HMGN2P13-201ENST00000476476 274 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
BRF2Q9HAW0 KCTD9P5-201ENST00000504141 1170 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 RNU6-711P-201ENST00000517255 106 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.44□□□□□ -1.86
BRF2Q9HAW0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.44□□□□□ -1.86
BRF2Q9HAW0 AGGF1P4-201ENST00000568249 801 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 AL391840.1-201ENST00000571144 367 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.44□□□□□ -1.86
BRF2Q9HAW0 AL161729.4-201ENST00000604650 476 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 AC103710.2-201ENST00000609912 942 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 AC005332.10-201ENST00000612725 619 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 RNVU1-4-201ENST00000612985 164 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
BRF2Q9HAW0 AL589994.2-201ENST00000621124 579 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 AC068724.3-201ENST00000625906 87 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
BRF2Q9HAW0 LRRC77P-213ENST00000637727 880 ntBASIC3.44□□□□□ -1.86
BRF2Q9HAW0 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.44□□□□□ -1.86
BRF2Q9HAW0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.44□□□□□ -1.86
BRF2Q9HAW0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
BRF2Q9HAW0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms