Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AP000553.6-201ENST00000641242 118 ntBASIC3.49□□□□□ -1.85
POLR1BQ9H9Y6 AL079305.1-201ENST00000623159 3008 ntBASIC3.49□□□□□ -1.85
POLR1BQ9H9Y6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.49□□□□□ -1.85
POLR1BQ9H9Y6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
POLR1BQ9H9Y6 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
POLR1BQ9H9Y6 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
POLR1BQ9H9Y6 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
POLR1BQ9H9Y6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 MIR514A1-201ENST00000385133 98 ntBASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 RNA5SP107-201ENST00000411358 122 ntBASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AC245054.1-201ENST00000420944 258 ntBASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AC019097.1-201ENST00000424783 735 ntBASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AC137499.1-201ENST00000427602 88 ntBASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AC005326.1-201ENST00000429197 123 ntBASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AC115115.1-201ENST00000449927 248 ntBASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 RPS20P20-201ENST00000460498 340 ntBASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 RPS27AP1-201ENST00000475545 471 ntBASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 ARL2BPP4-201ENST00000506854 471 ntBASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 RNU6-64P-201ENST00000517119 105 ntBASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AP003122.4-201ENST00000530980 758 ntBASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AC007115.1-201ENST00000546853 234 ntBASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AL355836.1-201ENST00000555951 870 ntBASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 TGIF1P1-201ENST00000558095 802 ntBASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 RN7SKP299-201ENST00000606679 301 ntBASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AC092628.2-201ENST00000622492 339 ntBASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 AC091152.2-201ENST00000591628 2569 ntBASIC3.48□□□□□ -1.85
POLR1BQ9H9Y6 TEX21P-201ENST00000447107 1476 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AL136164.4-201ENST00000625013 2135 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 ZNF807-201ENST00000328088 1707 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AC093908.1-201ENST00000623125 8092 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AP002088.1-201ENST00000382740 395 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 MIR128-1-201ENST00000384921 82 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 U3.42-201ENST00000408746 214 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 ARF4P2-201ENST00000430209 526 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AL158071.1-201ENST00000430315 461 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 SETP5-201ENST00000437270 562 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 RPS4XP22-201ENST00000480755 780 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 RNU2-27P-201ENST00000516185 142 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 RNU1-103P-201ENST00000516502 125 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AC011979.2-201ENST00000527568 352 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AC123904.3-201ENST00000547218 814 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AC093012.1-202ENST00000549403 582 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 NRBF2P1-201ENST00000587407 859 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 HMGN1P30-201ENST00000589286 268 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AC006077.1-201ENST00000604746 343 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AC064872.1-201ENST00000604823 1072 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AL391813.2-201ENST00000609113 322 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AC008250.2-201ENST00000615261 205 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AC010133.1-201ENST00000615809 842 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 FRG1KP-201ENST00000623592 341 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 AC090582.1-201ENST00000636321 199 ntBASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
POLR1BQ9H9Y6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.46□□□□□ -1.85
POLR1BQ9H9Y6 FARSBP1-201ENST00000435808 1778 ntBASIC3.46□□□□□ -1.86
POLR1BQ9H9Y6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.46□□□□□ -1.86
POLR1BQ9H9Y6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.46□□□□□ -1.86
POLR1BQ9H9Y6 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms