Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 AC004453.1-201ENST00000487895 408 ntBASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 RN7SKP82-201ENST00000516786 223 ntBASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 SDR42E1P1-201ENST00000611327 477 ntBASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 AC091953.5-201ENST00000622919 233 ntBASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 AL450326.2-201ENST00000421913 1962 ntBASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 HSPA8P1-201ENST00000425843 1833 ntBASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 AC107027.3-201ENST00000565095 3473 ntBASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 LINC01109-201ENST00000603837 3081 ntBASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 RNU1-130P-201ENST00000363930 160 ntBASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 RNU6-740P-201ENST00000364734 105 ntBASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 MIR223-201ENST00000385204 110 ntBASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 MIR1271-201ENST00000408537 86 ntBASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 DPPA2P3-201ENST00000411853 655 ntBASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 Z95327.1-201ENST00000446082 482 ntBASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 GAPDHP27-201ENST00000447427 1020 ntBASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 RN7SL443P-201ENST00000464331 290 ntBASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 RN7SL222P-201ENST00000476452 299 ntBASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 IGKV2-23-201ENST00000518729 323 ntBASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 IGLV2-28-201ENST00000520681 304 ntBASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 AC087441.2-201ENST00000529141 262 ntBASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 AC012119.1-201ENST00000603184 222 ntBASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 AC126915.2-201ENST00000610957 190 ntBASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 SNHG22-203ENST00000617833 660 ntBASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 AL137003.2-201ENST00000606924 2538 ntBASIC5.51□□□□□ -1.53
NUCKS1Q9H1E3 AL672167.1-204ENST00000641875 3017 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 RNU6-1266P-201ENST00000362794 105 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 snoU2_19.2-201ENST00000363024 80 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 RNA5SP391-201ENST00000363456 119 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 RNU6-1303P-201ENST00000364841 107 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 RNU6-701P-201ENST00000384059 107 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 MIR628-201ENST00000385229 95 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 RNU6-754P-201ENST00000391166 107 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 OR2AH1P-201ENST00000425717 928 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 SETP5-201ENST00000437270 562 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 DAP3P1-201ENST00000441522 278 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 AC073587.1-201ENST00000447093 876 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 AL356981.1-201ENST00000454879 684 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 RNU6-1218P-201ENST00000458990 108 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 AC005532.2-201ENST00000467154 373 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 AC006499.3-201ENST00000506077 748 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 RNU6-911P-201ENST00000516523 104 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 AP006587.4-201ENST00000526053 529 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 AP002392.1-201ENST00000537692 208 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 AC004584.2-201ENST00000570407 410 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 MIR4273-201ENST00000582824 84 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 MZT1P2-201ENST00000604387 248 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 AP005432.2-201ENST00000608162 586 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 AL161637.1-201ENST00000622380 412 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 MIR6719-201ENST00000622428 87 ntBASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.5□□□□□ -1.53
NUCKS1Q9H1E3 Y_RNA.81-201ENST00000362997 102 ntBASIC5.49□□□□□ -1.53
NUCKS1Q9H1E3 RNU6-682P-201ENST00000363843 106 ntBASIC5.49□□□□□ -1.53
NUCKS1Q9H1E3 RNU6-704P-201ENST00000364162 103 ntBASIC5.49□□□□□ -1.53
NUCKS1Q9H1E3 RNU1-43P-201ENST00000365052 165 ntBASIC5.49□□□□□ -1.53
NUCKS1Q9H1E3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.49□□□□□ -1.53
NUCKS1Q9H1E3 RNU6-790P-201ENST00000384479 105 ntBASIC5.49□□□□□ -1.53
NUCKS1Q9H1E3 MIR613-201ENST00000385248 95 ntBASIC5.49□□□□□ -1.53
NUCKS1Q9H1E3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5.49□□□□□ -1.53
NUCKS1Q9H1E3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.49□□□□□ -1.53
NUCKS1Q9H1E3 EI24P4-201ENST00000423683 1078 ntBASIC5.49□□□□□ -1.53
NUCKS1Q9H1E3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms