Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.74□□□□□ -1.81
USP44Q9H0E7 MTCO3P28-201ENST00000513351 515 ntBASIC3.74□□□□□ -1.81
USP44Q9H0E7 AC060788.1-201ENST00000521318 469 ntBASIC3.74□□□□□ -1.81
USP44Q9H0E7 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
USP44Q9H0E7 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.74□□□□□ -1.81
USP44Q9H0E7 UBE2L4-201ENST00000587688 464 ntBASIC3.74□□□□□ -1.81
USP44Q9H0E7 AP001981.2-201ENST00000603241 418 ntBASIC3.74□□□□□ -1.81
USP44Q9H0E7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
USP44Q9H0E7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.74□□□□□ -1.81
USP44Q9H0E7 AL158801.5-201ENST00000623123 465 ntBASIC3.74□□□□□ -1.81
USP44Q9H0E7 AC019226.1-201ENST00000625666 515 ntBASIC3.74□□□□□ -1.81
USP44Q9H0E7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.74□□□□□ -1.81
USP44Q9H0E7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.74□□□□□ -1.81
USP44Q9H0E7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.74□□□□□ -1.81
USP44Q9H0E7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USP44Q9H0E7 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.74□□□□□ -1.81
USP44Q9H0E7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USP44Q9H0E7 AP003122.5-201ENST00000527668 3766 ntBASIC3.74□□□□□ -1.81
USP44Q9H0E7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
USP44Q9H0E7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
USP44Q9H0E7 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
USP44Q9H0E7 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
USP44Q9H0E7 MIR148B-201ENST00000362252 99 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 RNU5E-5P-201ENST00000365379 116 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 Y_RNA.548-201ENST00000384656 105 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 UBA52P6-201ENST00000399822 382 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 SSXP9-201ENST00000417503 292 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 AL356867.1-201ENST00000429623 299 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 AL139132.1-201ENST00000431587 344 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.73□□□□□ -1.81
USP44Q9H0E7 GDI2P2-201ENST00000445131 608 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 TAF9P1-201ENST00000445421 515 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 COX6CP12-201ENST00000446748 202 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.73□□□□□ -1.81
USP44Q9H0E7 TAF9P2-201ENST00000454958 515 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 AC108059.3-201ENST00000456388 214 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 RNU7-170P-201ENST00000459303 61 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 SNRPGP3-201ENST00000469405 227 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 AC108860.1-201ENST00000484521 383 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.73□□□□□ -1.81
USP44Q9H0E7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.73□□□□□ -1.81
USP44Q9H0E7 MTND5P13-201ENST00000513046 1079 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 FABP5P5-201ENST00000515537 406 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 ERHP1-201ENST00000523006 310 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 OR5G4P-201ENST00000525251 760 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 AP000907.2-201ENST00000530827 353 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USP44Q9H0E7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.73□□□□□ -1.81
USP44Q9H0E7 AC011471.1-201ENST00000585766 187 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 NBR2-204ENST00000587322 63 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 AL033523.1-201ENST00000605153 153 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 AC068276.1-201ENST00000605793 379 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 AC103710.1-201ENST00000610003 901 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
USP44Q9H0E7 AC009878.1-201ENST00000621819 340 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 AC095031.1-201ENST00000623685 672 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 AC025048.6-202ENST00000627667 438 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.73□□□□□ -1.81
USP44Q9H0E7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
USP44Q9H0E7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.73□□□□□ -1.81
USP44Q9H0E7 ZNF807-201ENST00000328088 1707 ntBASIC3.73□□□□□ -1.81
USP44Q9H0E7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USP44Q9H0E7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.72□□□□□ -1.81
USP44Q9H0E7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.72□□□□□ -1.81
USP44Q9H0E7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
USP44Q9H0E7 AF127577.6-201ENST00000623352 2191 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USP44Q9H0E7 AC021755.1-201ENST00000559747 1447 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
USP44Q9H0E7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
USP44Q9H0E7 Y_RNA.46-201ENST00000362695 102 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 Y_RNA.77-201ENST00000362962 107 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 RNU1-140P-201ENST00000365040 165 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 RNU6-533P-201ENST00000384144 107 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 RNU6-278P-201ENST00000390945 109 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 AL109755.1-201ENST00000401791 649 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 Z92545.1-201ENST00000411782 234 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.72□□□□□ -1.81
USP44Q9H0E7 AC016907.1-201ENST00000419483 435 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 AC006366.1-201ENST00000422002 759 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 CYCSP46-201ENST00000423569 204 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 AC079780.1-201ENST00000428259 207 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.72□□□□□ -1.81
USP44Q9H0E7 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.72□□□□□ -1.81
USP44Q9H0E7 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.72□□□□□ -1.81
USP44Q9H0E7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USP44Q9H0E7 CFTRP1-201ENST00000456646 183 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 AC078785.3-201ENST00000476607 425 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 AC055855.1-201ENST00000489563 579 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.72□□□□□ -1.81
USP44Q9H0E7 CDC42P4-201ENST00000510507 563 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 AC022878.1-201ENST00000530684 149 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.72□□□□□ -1.81
USP44Q9H0E7 AC022080.3-201ENST00000544433 482 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.72□□□□□ -1.81
USP44Q9H0E7 H3F3AP1-201ENST00000559984 334 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.72□□□□□ -1.81
USP44Q9H0E7 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 AC105224.1-201ENST00000587055 421 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms